Henry Markram

  • Swiss Federal Institute of Technology in Lausanne, Switzerland

According to our database1, Henry Markram authored at least 60 papers between 1996 and 2021.

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In proceedings 
PhD thesis 


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On csauthors.net:


Supervised Learning With Perceptual Similarity for Multimodal Gene Expression Registration of a Mouse Brain Atlas.
Frontiers Neuroinformatics, 2021

Interactive visualization and analysis of morphological skeletons of brain vasculature networks with VessMorphoVis.
Bioinform., 2020

Data driven building of realistic neuron model using IBEA and CMA evolution strategies.
Proceedings of the GECCO '20: Genetic and Evolutionary Computation Conference, 2020

Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons.
PLoS Comput. Biol., 2019

A Brief History of Simulation Neuroscience.
Frontiers Neuroinformatics, 2019

Corrigendum: A Cell Atlas for the Mouse Brain.
Frontiers Neuroinformatics, 2019

The physiological variability of channel density in hippocampal CA1 pyramidal cells and interneurons explored using a unified data-driven modeling workflow.
PLoS Comput. Biol., 2018

A Topological Representation of Branching Neuronal Morphologies.
Neuroinformatics, 2018

A Cell Atlas for the Mouse Brain.
Frontiers Neuroinformatics, 2018

NeuroMorphoVis: a collaborative framework for analysis and visualization of neuronal morphology skeletons reconstructed from microscopy stacks.
Bioinform., 2018

Cliques of Neurons Bound into Cavities Provide a Missing Link between Structure and Function.
Frontiers Comput. Neurosci., 2017

A Physically Plausible Model for Rendering Highly Scattering Fluorescent Participating Media.
CoRR, 2017

Reconstruction and visualization of large-scale volumetric models of neocortical circuits for physically-plausible in silico optical studies.
BMC Bioinform., 2017

Bio-physically plausible visualization of highly scattering fluorescent neocortical models for in silico experimentation.
BMC Bioinform., 2017

BluePyOpt: Leveraging Open Source Software and Cloud Infrastructure to Optimise Model Parameters in Neuroscience.
Frontiers Neuroinformatics, 2016

Quantifying topological invariants of neuronal morphologies.
CoRR, 2016

Physically-based Rendering of Highly Scattering Fluorescent Solutions using Path Tracing.
Proceedings of the 37th Annual Conference of the European Association for Computer Graphics, 2016

An Exclusion Zone for Ca<sup>2+</sup> Channels around Docked Vesicles Explains Release Control by Multiple Channels at a CNS Synapse.
PLoS Comput. Biol., 2015

An algorithm to predict the connectome of neural microcircuits.
Frontiers Comput. Neurosci., 2015

A Computational Model of Light-Sheet Fluorescence Microscopy using Physically-based Rendering.
Proceedings of the 36th Annual Conference of the European Association for Computer Graphics, 2015

OCTOPUS: Efficient query execution on dynamic mesh datasets.
Proceedings of the IEEE 30th International Conference on Data Engineering, Chicago, 2014

A Neuron Membrane Mesh Representation for Visualization of Electrophysiological Simulations.
IEEE Trans. Vis. Comput. Graph., 2012

SCOUT: Prefetching for Latent Feature Following Queries.
Proc. VLDB Endow., 2012

Accelerating Range Queries for Brain Simulations.
Proceedings of the IEEE 28th International Conference on Data Engineering (ICDE 2012), 2012

Liquid Computing in a Simplified Model of Cortical Layer IV: Learning to Balance a Ball.
Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2012, 2012

Introducing the Human Brain Project.
Proceedings of the 2nd European Future Technologies Conference and Exhibition, 2011

Models of Neocortical Layer 5b Pyramidal Cells Capturing a Wide Range of Dendritic and Perisomatic Active Properties.
PLoS Comput. Biol., 2011

Effective Stimuli for Constructing Reliable Neuron Models.
PLoS Comput. Biol., 2011

Channelpedia: An Integrative and Interactive Database for Ion Channels.
Frontiers Neuroinformatics, 2011

A component-based extension framework for large-scale parallel simulations in NEURON.
Frontiers Neuroinformatics, 2009

Multiquantal release underlies the distribution of synaptic efficacies in the neocortex.
Frontiers Comput. Neurosci., 2009

Slow oscillations in neural networks with facilitating synapses.
J. Comput. Neurosci., 2008

Fully implicit parallel simulation of single neurons.
J. Comput. Neurosci., 2008

Inferring connection proximity in networks of electrically coupled cells by subthreshold frequency response analysis.
J. Comput. Neurosci., 2008

Identifying, tabulating, and analyzing contacts between branched neuron morphologies.
IBM J. Res. Dev., 2008

Minimal Hodgkin-Huxley type models for different classes of cortical and thalamic neurons.
Biol. Cybern., 2008

Evaluating automated parameter constraining procedures of neuron models by experimental and surrogate data.
Biol. Cybern., 2008

Network-Related Challenges and Insights from Neuroscience.
Proceedings of the Bio-Inspired Computing and Communication, 2007

Parallel network simulations with NEURON.
J. Comput. Neurosci., 2006

Biology - The blue brain project.
Proceedings of the ACM/IEEE SC2006 Conference on High Performance Networking and Computing, 2006

Short-Term Synaptic Plasticity Orchestrates the Response of Pyramidal Cells and Interneurons to Population Bursts.
J. Comput. Neurosci., 2005

Subthreshold cross-correlations between cortical neurons: A reference model with static synapses.
Neurocomputing, 2005

Accurate dynamical models of interneuronal GABAergic channel physiologies.
Neurocomputing, 2005

NEOBASE: Databasing the Neocortical Microcircuit.
Proceedings of the From Grid to Healthgrid, 2005

On the computational power of circuits of spiking neurons.
J. Comput. Syst. Sci., 2004

Perspectives of the high-dimensional dynamics of neural microcircuits from the point of view of low-dimensional readouts.
Complex., 2003

Deriving physical connectivity from neuronal morphology.
Biol. Cybern., 2003

Elementary Principles of Nonlinear Synaptic Transmission.
Proceedings of the Computational Models for Neuroscience, 2003

Synapses as dynamic memory buffers.
Neural Networks, 2002

Real-Time Computing Without Stable States: A New Framework for Neural Computation Based on Perturbations.
Neural Comput., 2002

On the Computational Power of Recurrent Circuits of Spiking Neurons
Electron. Colloquium Comput. Complex., 2002

A Model for Real-Time Computation in Generic Neural Microcircuits.
Proceedings of the Advances in Neural Information Processing Systems 15 [Neural Information Processing Systems, 2002

A New Approach towards Vision Suggested by Biologically Realistic Neural Microcircuit Models.
Proceedings of the Biologically Motivated Computer Vision Second International Workshop, 2002

Introduction: Spiking Neurons in Neuroscience and Technology.
Neural Networks, 2001

An Algorithm for Modifying Neurotransmitter Release Probability Based on Pre- and Postsynaptic Spike Timing.
Neural Comput., 2001

Neural Networks with Dynamic Synapses.
Neural Comput., 1998

Competitive Calcium Binding: Implications for Dendritic Calcium Signaling.
J. Comput. Neurosci., 1998

An Algorithm for Synaptic Modification Based on Exact Timing of Pre- and Post-Synaptic Action Potentials.
Proceedings of the Artificial Neural Networks, 1997

The Information Content of Action Potential Trains - A Synaptic Basis.
Proceedings of the Artificial Neural Networks, 1997

Plasticity of Neocortical Synapses Enables Transitions between Rate and Temporal Coding.
Proceedings of the Artificial Neural Networks, 1996