Huifeng Zhao

According to our database, Huifeng Zhao authored at least 24 papers between 2009 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

ECloudGen: leveraging electron clouds as a latent variable to scale up structure-based molecular design.

Odin Zhang, Jieyu Jin, Zhenxing Wu, Jintu Zhang, Po Yuan, Yuntao Yu, Haitao Lin, Haiyang Zhong, Xujun Zhang, Chenqing Hua, Weibo Zhao, Zhengshuo Zhang, Kejun Ying, Yufei Huang, Huifeng Zhao, Yu Kang, Peichen Pan, Jike Wang, Dong Guo, Shuangjia Zheng, Chang-Yu Hsieh, Tingjun Hou

Nat. Comput. Sci., November, 2025

ChemEnzyRetroPlanner Agent.

Xiaorui Wang, Xiaodan Yin, Xujun Zhang, Huifeng Zhao, Shukai Gu, Zhenxing Wu, Odin Zhang, Wenjia Qian, Yuansheng Huang, Yuquan Li, Dejun Jiang, Mingyang Wang, Huanxiang Liu, Xiaojun Yao, Chang-Yu Hsieh, Tingjun Hou

Dataset, October, 2025

ChemEnzyRetroPlanner.

Xiaorui Wang, Xiaodan Yin, Xujun Zhang, Huifeng Zhao, Shukai Gu, Zhenxing Wu, Odin Zhang, Wenjia Qian, Yuansheng Huang, Yuquan Li, Dejun Jiang, Mingyang Wang, Huanxiang Liu, Xiaojun Yao, Chang-Yu Hsieh, Tingjun Hou

Dataset, October, 2025

ChemEnzyRetroPlanner Agent.

Xiaorui Wang, Xiaodan Yin, Xujun Zhang, Huifeng Zhao, Shukai Gu, Zhenxing Wu, Odin Zhang, Wenjia Qian, Yuansheng Huang, Yuquan Li, Dejun Jiang, Mingyang Wang, Huanxiang Liu, Xiaojun Yao, Chang-Yu Hsieh, Tingjun Hou

Dataset, October, 2025

Benchmarking AI-powered docking methods from the perspective of virtual screening.

Shukai Gu, Chao Shen, Xujun Zhang, Huiyong Sun, Heng Cai, Hao Luo, Huifeng Zhao, Bo Liu, Hongyan Du, Yihao Zhao, Chenggong Fu, Silong Zhai, Yafeng Deng, Huanxiang Liu, Tingjun Hou, Yu Kang

Nat. Mac. Intell., 2025

Deep lead optimization enveloped in protein pocket and its application in designing potent and selective ligands targeting LTK protein.

Shicheng Chen, Odin Zhang, Chenran Jiang, Huifeng Zhao, Xujun Zhang, Mengting Chen, Yun Liu, Qun Su, Zhenxing Wu, Xinyue Wang, Wanglin Qu, Yuanyi Ye, Xin Chai, Ning Wang, Tianyue Wang, Yuan An, Guanlin Wu, Qianqian Yang, Jiean Chen, Wei Xie, Haitao Lin, Dan Li, Chang-Yu Hsieh, Yong Huang, Yu Kang, Tingjun Hou, Peichen Pan

Nat. Mac. Intell., 2025

PepPCBench is a Comprehensive Benchmarking Framework for Protein-Peptide Complex Structure Prediction.

Silong Zhai, Huifeng Zhao, Jike Wang, Shaolong Lin, Tiantao Liu, Shukai Gu, Dejun Jiang, Huanxiang Liu, Yu Kang, Xiaojun Yao, Tingjun Hou

J. Chem. Inf. Model., 2025

Durian: A Comprehensive Benchmark for Structure-Based 3D Molecular Generation.

Dou Nie, Huifeng Zhao, Odin Zhang, Gaoqi Weng, Hui Zhang, Jieyu Jin, Haitao Lin, Yufei Huang, Liwei Liu, Dan Li, Tingjun Hou, Yu Kang

J. Chem. Inf. Model., 2025

Improving the predictive performance of binding affinities and poses for protein-cyclic peptide complexes through fine-tuned MM/PBSA(GBSA)-based methods.

Huifeng Zhao, Jianxiang Huang, Gaoqi Weng, Dejun Jiang, Renling Hu, Yu Kang, Tingjun Hou

Briefings Bioinform., 2025

Multi-Dimensional Analysis of Dairy Production Costs and Optimization of Consumption Reduction Strategies Based on Deep Learning and Causal reasoning.

Xin Liu, Yuanpei Cui, Yanan Zhang, Huifeng Zhao

IEEE Access, 2025

2024

Leveraging language model for advanced multiproperty molecular optimization via prompt engineering.

Zhenxing Wu, Odin Zhang, Xiaorui Wang, Li Fu, Huifeng Zhao, Jike Wang, Hongyan Du, Dejun Jiang, Yafeng Deng, Dong-Sheng Cao, Chang-Yu Hsieh, Tingjun Hou

Nat. Mac. Intell., 2024

Comprehensive Evaluation of 10 Docking Programs on a Diverse Set of Protein-Cyclic Peptide Complexes.

Huifeng Zhao, Dejun Jiang, Chao Shen, Jintu Zhang, Xujun Zhang, Xiaorui Wang, Dou Nie, Tingjun Hou, Yu Kang

J. Chem. Inf. Model., 2024

Token-Mol 1.0: Tokenized drug design with large language model.

Jike Wang, Rui Qin, Mingyang Wang, Meijing Fang, Yangyang Zhang, Yuchen Zhu, Qun Su, Qiaolin Gou, Chao Shen, Odin Zhang, Zhenxing Wu, Dejun Jiang, Xujun Zhang, Huifeng Zhao, Xiaozhe Wan, Zhourui Wu, Liwei Liu, Yu Kang, Chang-Yu Hsieh, Tingjun Hou

CoRR, 2024

Deep Lead Optimization: Leveraging Generative AI for Structural Modification.

Odin Zhang, Haitao Lin, Hui Zhang, Huifeng Zhao, Yufei Huang, Yuansheng Huang, Dejun Jiang, Chang-Yu Hsieh, Peichen Pan, Tingjun Hou

CoRR, 2024

Deep Geometry Handling and Fragment-wise Molecular 3D Graph Generation.

Odin Zhang, Yufei Huang, Shichen Cheng, Mengyao Yu, Xujun Zhang, Haitao Lin, Yundian Zeng, Mingyang Wang, Zhenxing Wu, Huifeng Zhao, Zaixi Zhang, Chenqing Hua, Yu Kang, Sunliang Cui, Peichen Pan, Chang-Yu Hsieh, Tingjun Hou

CoRR, 2024

PPFLOW: Target-Aware Peptide Design with Torsional Flow Matching.

Haitao Lin, Odin Zhang, Huifeng Zhao, Dejun Jiang, Lirong Wu, Zicheng Liu, Yufei Huang, Stan Z. Li

Proceedings of the Forty-first International Conference on Machine Learning, 2024

2023

Learning on topological surface and geometric structure for 3D molecular generation.

Odin Zhang, Tianyue Wang, Gaoqi Weng, Dejun Jiang, Ning Wang, Xiaorui Wang, Huifeng Zhao, Jialu Wu, Ercheng Wang, Guangyong Chen, Yafeng Deng, Peichen Pan, Yu Kang, Chang-Yu Hsieh, Tingjun Hou

Nat. Comput. Sci., 2023

Infinite Physical Monkey: Do Deep Learning Methods Really Perform Better in Conformation Generation?

Haotian Zhang, Jintu Zhang, Huifeng Zhao, Dejun Jiang, Yafeng Deng

CoRR, 2023

2022

ANFIS-EKF-Based Single-Beacon Localization Algorithm for AUV.

Wanlong Zhao, Huifeng Zhao, Gongliang Liu, Guoyao Zhang

Remote. Sens., 2022

High Myopia Detection Method On Fundus Images Based On Curriculum Learning.

Huifeng Zhao, Zhilong Ma, Yu Guan, Jianqiang Li, Yu-Chih Wei

Proceedings of the 46th IEEE Annual Computers, Software, and Applications Conferenc, 2022

2021

Dairy brand loyalty measurement model based on machine learning clustering algorithm.

Xiujuan Liu, Huifeng Zhao

J. Intell. Fuzzy Syst., 2021

A Novel Factor Graph and Cubature Kalman Filter Integrated Algorithm for Single-Transponder-Aided Cooperative Localization.

Wanlong Zhao, Huifeng Zhao, Deyue Zou, Lu Liu

Entropy, 2021

A Single Beacon-aided Cooperative Localization Algorithm based on Maximum Correntropy Criterion.

Wanlong Zhao, Huifeng Zhao, Lu Liu

Proceedings of the 17th International Wireless Communications and Mobile Computing, 2021

2009

Study on Application of Data Mining Technology to Modern Logistics Management Decision.

Congna Quan, Huifeng Zhao, Bo Li

Proceedings of the International Forum on Information Technology and Applications, 2009