Ian Walsh

According to our database, Ian Walsh authored at least 25 papers between 2006 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

FUTURE-AI: International consensus guideline for trustworthy and deployable artificial intelligence in healthcare.

Karim Lekadir, Aasa Feragen, Abdul Joseph Fofanah, Alejandro F. Frangi, Alena Buyx, Anais Emelie, Andrea Lara, Antonio R. Porras, An-Wen Chan, Arcadi Navarro, Ben Glocker, Benard Ohene Botwe, Bishesh Khanal, Brigit Beger, Carol C. Wu, Celia Cintas, Curtis P. Langlotz, Daniel Rueckert, Deogratias Mzurikwao, Dimitrios I. Fotiadis, Doszhan Zhussupov, Enzo Ferrante, Erik Meijering, Eva Weicken, Fabio A. González, Folkert W. Asselbergs, Fred W. Prior, Gabriel P. Krestin, Gary S. Collins, Geletaw Sahle Tegenaw, Georgios Kaissis, Gianluca Misuraca, Gianna Tsakou, Girish Dwivedi, Haridimos Kondylakis, Harsha Jayakody, Henry C. Woodruff, Hugo J. W. L. Aerts, Ian Walsh, Ioanna Chouvarda, Irène Buvat, Islem Rekik, James S. Duncan, Jayashree Kalpathy-Cramer, Jihad Zahir, Jinah Park, John Mongan, Judy W. Gichoya, Julia A. Schnabel, et al.

CoRR, 2023

2020

Recommendations for machine learning validation in biology.

Ian Walsh, Dmytro Fishman, Dario Garcia-Gasulla, Tiina Titma, Jen Harrow, Fotis E. Psomopoulos, Silvio C. E. Tosatto

CoRR, 2020

2019

GlycanAnalyzer: software for automated interpretation of N-glycan profiles after exoglycosidase digestions.

Ian Walsh, Terry Nguyen-Khuong, Katherine Wongtrakul-Kish, Shi Jie Tay, Daniel Chew, Tasha José, Christopher H. Taron, Pauline M. Rudd

Bioinform., 2019

2018

GlycoStore: a database of retention properties for glycan analysis.

Sophie Zhao, Ian Walsh, Jodie L. Abrahams, Louise Royle, Terry Nguyen-Khuong, Daniel Spencer, Daryl L. Fernandes, Nicolle H. Packer, Pauline M. Rudd, Matthew P. Campbell

Bioinform., 2018

2017

FELLS: fast estimator of latent local structure.

Damiano Piovesan, Ian Walsh, Giovanni Minervini, Silvio C. E. Tosatto

Bioinform., 2017

2016

Correct machine learning on protein sequences: a peer-reviewing perspective.

Ian Walsh, Gianluca Pollastri, Silvio C. E. Tosatto

Briefings Bioinform., 2016

2015

MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins.

Emilio Potenza, Tomás Di Domenico, Ian Walsh, Silvio C. E. Tosatto

Nucleic Acids Res., 2015

Comprehensive large-scale assessment of intrinsic protein disorder.

Ian Walsh, Manuel Giollo, Tomás Di Domenico, Carlo Ferrari, Olav Zimmermann, Silvio C. E. Tosatto

Bioinform., 2015

2014

PASTA 2.0: an improved server for protein aggregation prediction.

Ian Walsh, Flavio Seno, Silvio C. E. Tosatto, Antonio Trovato

Nucleic Acids Res., 2014

RepeatsDB: a database of tandem repeat protein structures.

Tomás Di Domenico, Emilio Potenza, Ian Walsh, R. Gonzalo Parra, Manuel Giollo, Giovanni Minervini, Damiano Piovesan, Awais Ihsan, Carlo Ferrari, Andrey V. Kajava, Silvio C. E. Tosatto

Nucleic Acids Res., 2014

Toward an accurate prediction of inter-residue distances in proteins using 2D recursive neural networks.

Predrag Kukic, Claudio Mirabello, Giuseppe Tradigo, Ian Walsh, Pierangelo Veltri, Gianluca Pollastri

BMC Bioinform., 2014

2013

Analysis and consensus of currently available intrinsic protein disorder annotation sources in the MobiDB database.

Tomás Di Domenico, Ian Walsh, Silvio C. E. Tosatto

BMC Bioinform., 2013

2012

RAPHAEL: recognition, periodicity and insertion assignment of solenoid protein structures.

Ian Walsh, Francesco Sirocco, Giovanni Minervini, Tomás Di Domenico, Carlo Ferrari, Silvio C. E. Tosatto

Bioinform., 2012

ESpritz: accurate and fast prediction of protein disorder.

Ian Walsh, Alberto J. M. Martin, Tomás Di Domenico, Silvio C. E. Tosatto

Bioinform., 2012

Bluues server: electrostatic properties of wild-type and mutated protein structures.

Ian Walsh, Giovanni Minervini, Alessandra Corazza, Gennaro Esposito, Silvio C. E. Tosatto, Federico Fogolari

Bioinform., 2012

MobiDB: a comprehensive database of intrinsic protein disorder annotations.

Tomás Di Domenico, Ian Walsh, Alberto J. M. Martin, Silvio C. E. Tosatto

Bioinform., 2012

2011

CSpritz: accurate prediction of protein disorder segments with annotation for homology, secondary structure and linear motifs.

Ian Walsh, Alberto J. M. Martin, Tomás Di Domenico, Alessandro Vullo, Gianluca Pollastri, Silvio C. E. Tosatto

Nucleic Acids Res., 2011

RING: networking interacting residues, evolutionary information and energetics in protein structures.

Alberto J. M. Martin, Michele Vidotto, Filippo Boscariol, Tomás Di Domenico, Ian Walsh, Silvio C. E. Tosatto

Bioinform., 2011

2010

MOBI: a web server to define and visualize structural mobility in NMR protein ensembles.

Alberto J. M. Martin, Ian Walsh, Silvio C. E. Tosatto

Bioinform., 2010

2009

Ab initio and homology based prediction of protein domains by recursive neural networks.

Ian Walsh, Alberto J. M. Martin, Catherine Mooney, Enrico Rubagotti, Alessandro Vullo, Gianluca Pollastri

BMC Bioinform., 2009

Recursive Neural Networks for Undirected Graphs for Learning Molecular Endpoints.

Ian Walsh, Alessandro Vullo, Gianluca Pollastri

Proceedings of the Pattern Recognition in Bioinformatics, 2009

An adaptive model for learning molecular endpoints.

Ian Walsh, Alessandro Vullo, Gianluca Pollastri

Proceedings of the Similarity-based learning on structures, 15.02. - 20.02.2009, 2009

2008

Long-Range Information and Physicality Constraints Improve predicted protein Contact Maps.

Alberto J. M. Martin, Davide Baù, Alessandro Vullo, Ian Walsh, Gianluca Pollastri

J. Bioinform. Comput. Biol., 2008

2006

A two-stage approach for improved prediction of residue contact maps.

Alessandro Vullo, Ian Walsh, Gianluca Pollastri

BMC Bioinform., 2006

Distill: a suite of web servers for the prediction of one-, two- and three-dimensional structural features of proteins.

Davide Baù, Alberto J. M. Martin, Catherine Mooney, Alessandro Vullo, Ian Walsh, Gianluca Pollastri

BMC Bioinform., 2006