Fotis E. Psomopoulos

Orcid: 0000-0002-0222-4273

According to our database1, Fotis E. Psomopoulos authored at least 35 papers between 2010 and 2023.

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Bibliography

2023
Galaxy Training: A powerful framework for teaching!
PLoS Comput. Biol., January, 2023

The ELIXIR Biodiversity Community: Understanding short- and long-term changes in biodiversity.
F1000Research, 2023

A metadata analysis for machine-actionable Software Management Plans.
Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023

A metadata schema for machine-actionable Software Management Plans.
Proceedings of the 3rd Workshop on Metadata and Research (objects) Management for Linked Open Science, 2023

2022
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update.
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Nucleic Acids Res., 2022

FAIR for AI: An interdisciplinary, international, inclusive, and diverse community building perspective.
CoRR, 2022

IgIDivA: immunoglobulin intraclonal diversification analysis.
Briefings Bioinform., 2022

2021
Working Towards Understanding the Role of FAIR for Machine Learning.
Proceedings of the DaMaLOS, 2021

2020
A framework to assess the quality and impact of bioinformatics training across ELIXIR.
PLoS Comput. Biol., 2020

Ten simple rules for making training materials FAIR.
PLoS Comput. Biol., 2020

A dockerized framework for hierarchical frequency-based document clustering on cloud computing infrastructures.
J. Cloud Comput., 2020

Towards FAIR principles for research software.
Data Sci., 2020

Recommendations for machine learning validation in biology.
CoRR, 2020

TRIP - T cell receptor/immunoglobulin profiler.
BMC Bioinform., 2020


2019
Reinforcement Learning based scheduling in a workflow management system.
Eng. Appl. Artif. Intell., 2019

Data Discovery Paradigms: User Requirements and Recommendations for Data Repositories.
Data Sci. J., 2019

A Dockerized String Analysis Workflow for Big Data.
Proceedings of the New Trends in Databases and Information Systems, 2019

2018
Eleven quick tips for finding research data.
PLoS Comput. Biol., 2018

A Multi-metric Algorithm for Hierarchical Clustering of Same-Length Protein Sequences.
Proceedings of the Artificial Intelligence Applications and Innovations, 2018

Lesson Development for Open Source Software Best Practices Adoption.
Proceedings of the 14th IEEE International Conference on e-Science, 2018

A Hierarchical Multi-Metric Framework for Item Clustering.
Proceedings of the 5th IEEE/ACM International Conference on Big Data Computing Applications and Technologies, 2018

2017
Hermes: Seamless delivery of containerized bioinformatics workflows in hybrid cloud (HTC) environments.
SoftwareX, 2017

Variable structure robot control systems: The RAPP approach.
Robotics Auton. Syst., 2017

Towards an integrated robotics architecture for social inclusion - The RAPP paradigm.
Cogn. Syst. Res., 2017

BioPAXViz: a cytoscape application for the visual exploration of metabolic pathway evolution.
Bioinform., 2017

2016
Data-aware optimization of bioinformatics workflows in hybrid clouds.
J. Big Data, 2016

RAPP: A Robotic-Oriented Ecosystem for Delivering Smart User Empowering Applications for Older People.
Int. J. Soc. Robotics, 2016

A Scalable Grid Computing Framework for Extensible Phylogenetic Profile Construction.
Proceedings of the Artificial Intelligence Applications and Innovations, 2016

2015
Inference of Pathway Decomposition Across Multiple Species Through Gene Clustering.
Int. J. Artif. Intell. Tools, 2015

A Grid-Enabled Modular Framework for Efficient Sequence Analysis Workflows.
Proceedings of the Engineering Applications of Neural Networks, 2015

2014
Algebraic Interpretations Towards Clustering Protein Homology Data.
Proceedings of the Artificial Intelligence Applications and Innovations, 2014

2012
Multi-Level Clustering of Phylogenetic Profiles.
Int. J. Artif. Intell. Tools, 2012

Multi-genome Core Pathway Identification through Gene Clustering.
Proceedings of the Artificial Intelligence Applications and Innovations, 2012

2010
Bioinformatics algorithm development for Grid environments.
J. Syst. Softw., 2010


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