Ivan Ivanov

Orcid: 0000-0002-5323-8325

Affiliations:
  • Texas A&M University, College Station, TX, USA


According to our database1, Ivan Ivanov authored at least 20 papers between 2004 and 2022.

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Bibliography

2022
Network Classification Based on Reducibility With Respect to the Stability of Canalizing Power of Genes in a Gene Regulatory Network - A Boolean Network Modeling Perspective.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

Comparative Study of Synthetic Bulk RNA-Seq Generators.
Proceedings of the Bioinformatics and Biomedical Engineering, 2022

2019
Quantifying the notions of canalizing and master genes in a gene regulatory network - a Boolean network modeling perspective.
Bioinform., 2019

2018
Detecting Multivariate Gene Interactions in RNA-Seq Data Using Optimal Bayesian Classification.
IEEE ACM Trans. Comput. Biol. Bioinform., 2018

2016
Model-based study of the Effectiveness of Reporting Lists of Small Feature Sets using RNA-Seq Data.
Proceedings of the 7th ACM International Conference on Bioinformatics, 2016

2014
MCMC implementation of the optimal Bayesian classifier for non-Gaussian models: model-based RNA-Seq classification.
BMC Bioinform., 2014

2013
Modeling the Next Generation Sequencing sample processing pipeline for the purposes of classification.
BMC Bioinform., 2013

Optimal control of gene regulatory networks with uncertain intervention effects.
Proceedings of the IEEE Global Conference on Signal and Information Processing, 2013

Bayesian multivariate Poisson model for RNA-seq classification.
Proceedings of the 2013 IEEE International Workshop on Genomic Signal Processing and Statistics, 2013

2012
Feature Selection for High-dimensional Integrated Data.
Proceedings of the Twelfth SIAM International Conference on Data Mining, 2012

2011
A CoD-based stationary control policy for intervening in large gene regulatory networks.
BMC Bioinform., 2011

Pathway analysis in the context of Bayesian networks - mathematical modeling of master and canalizing genes.
Proceedings of the 2011 IEEE International Workshop on Genomic Signal Processing and Statistics, 2011

2010
Selection policy-induced reduction mappings for Boolean networks.
IEEE Trans. Signal Process., 2010

Conditioning-based model for the regulatory activities of microRNAs in specific dietary contexts.
Proceedings of the 2010 IEEE International Workshop on Genomic Signal Processing and Statistics, 2010

2009
Intervention in gene regulatory networks via greedy control policies based on long-run behavior.
BMC Syst. Biol., 2009

A CoD based reduction algorithm for Boolean and probabilistic Boolean networks.
Proceedings of the 2009 IEEE International Workshop on Genomic Signal Processing and Statistics, 2009

2007
Dynamics Preserving Size Reduction Mappings for Probabilistic Boolean Networks.
IEEE Trans. Signal Process., 2007

2005
Generating Boolean networks with a prescribed attractor structure.
Bioinform., 2005

2004
Reduction Mappings between Probabilistic Boolean Networks.
EURASIP J. Adv. Signal Process., 2004

A Bayesian connectivity-based approach to constructing probabilistic gene regulatory networks.
Bioinform., 2004


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