Jamshed Khan

According to our database, Jamshed Khan authored at least 8 papers between 2021 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

Scaling Parallel Algorithms to Massive Datasets using Multi-SSD Machines.

Haohong Li, Jamshed Khan, Laxman Dhulipala

Proceedings of the 37th ACM Symposium on Parallelism in Algorithms and Architectures, 2025

2024

Parallel and External-Memory Algorithms for Large-Scale Genomic Sequence-Graph and -Index Construction.

Jamshed Khan

PhD thesis, 2024

2023

Fast, Parallel, and Cache-Friendly Suffix Array Construction.

Jamshed Khan, Tobias Rubel, Laxman Dhulipala, Erin K. Molloy, Rob Patro

Proceedings of the 23rd International Workshop on Algorithms in Bioinformatics, 2023

Fulgor: A Fast and Compact {k-mer} Index for Large-Scale Matching and Color Queries.

Jason Fan, Noor Pratap Singh, Jamshed Khan, Giulio Ermanno Pibiri, Rob Patro

Proceedings of the 23rd International Workshop on Algorithms in Bioinformatics, 2023

Spectrum Preserving Tilings Enable Sparse and Modular Reference Indexing.

Jason Fan, Jamshed Khan, Giulio Ermanno Pibiri, Rob Patro

Proceedings of the Research in Computational Molecular Biology, 2023

2022

An incrementally updatable and scalable system for large-scale sequence search using the Bentley-Saxe transformation.

Fatemeh Almodaresi, Jamshed Khan, Sergey Madaminov, Michael Ferdman, Rob Johnson, Prashant Pandey, Rob Patro

Bioinform., 2022

Homothetic Symmetries of Static Cylindrically Symmetric Spacetimes - A Rif Tree Approach.

Jamshed Khan, Tahir Hussain, Dania Santina, Nabil Mlaiki

Axioms, 2022

2021

Cuttlefish: fast, parallel and low-memory compaction of de Bruijn graphs from large-scale genome collections.

Jamshed Khan, Rob Patro

Bioinform., 2021