Jarrid Rector-Brooks

According to our database, Jarrid Rector-Brooks authored at least 26 papers between 2019 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2026

General Multimodal Protein Design Enables DNA-Encoding of Chemistry.

Jarrid Rector-Brooks, Théophile Lambert, Marta Skreta, Daniel Roth, Yueming Long, Zi-Qi Li, Xi Zhang, Miruna T. Cretu, Francesca-Zhoufan Li, Tanvi Ganapathy, Emily Jin, Avishek Joey Bose, Jason Yang, Kirill Neklyudov, Yoshua Bengio, Alexander Tong, Frances H. Arnold, Cheng-Hao Liu

CoRR, April, 2026

From discrete-time policies to continuous-time diffusion samplers: Asymptotic equivalences and faster training.

Julius Berner, Lorenz Richter, Marcin Sendera, Jarrid Rector-Brooks, Nikolay Malkin

Trans. Mach. Learn. Res., 2026

2025

OXtal: An All-Atom Diffusion Model for Organic Crystal Structure Prediction.

Emily Jin, Andrei Cristian Nica, Mikhail Galkin, Jarrid Rector-Brooks, Kin Long Kelvin Lee, Santiago Miret, Frances H. Arnold, Michael M. Bronstein, Avishek Joey Bose, Alexander Tong, Cheng-Hao Liu

CoRR, December, 2025

Planner Aware Path Learning in Diffusion Language Models Training.

Fred Zhangzhi Peng, Zachary Bezemek, Jarrid Rector-Brooks, Shuibai Zhang, Anru R. Zhang, Michael M. Bronstein, Avishek Joey Bose, Alexander Tong

CoRR, September, 2025

Solving Bayesian inverse problems with diffusion priors and off-policy RL.

Luca Scimeca, Siddarth Venkatraman, Moksh Jain, Minsu Kim, Marcin Sendera, Mohsin Hasan, Luke Rowe, Sarthak Mittal, Pablo Lemos, Emmanuel Bengio, Alexandre Adam, Jarrid Rector-Brooks, Yashar Hezaveh, Laurence Perreault Levasseur, Yoshua Bengio, Glen Berseth, Nikolay Malkin

CoRR, March, 2025

Path Planning for Masked Diffusion Model Sampling.

Zhangzhi Peng, Zachary Bezemek, Sawan Patel, Jarrid Rector-Brooks, Sherwood Yao, Alexander Tong, Pranam Chatterjee

CoRR, February, 2025

Steering Masked Discrete Diffusion Models via Discrete Denoising Posterior Prediction.

Jarrid Rector-Brooks, Mohsin Hasan, Zhangzhi Peng, Cheng-Hao Liu, Sarthak Mittal, Nouha Dziri, Michael M. Bronstein, Pranam Chatterjee, Alexander Tong, Joey Bose

Proceedings of the Thirteenth International Conference on Learning Representations, 2025

Adaptive teachers for amortized samplers.

Minsu Kim, Sanghyeok Choi, Taeyoung Yun, Emmanuel Bengio, Leo Feng, Jarrid Rector-Brooks, Sungsoo Ahn, Jinkyoo Park, Nikolay Malkin, Yoshua Bengio

Proceedings of the Thirteenth International Conference on Learning Representations, 2025

2024

Improving and generalizing flow-based generative models with minibatch optimal transport.

Alexander Tong, Kilian Fatras, Nikolay Malkin, Guillaume Huguet, Yanlei Zhang, Jarrid Rector-Brooks, Guy Wolf, Yoshua Bengio

Trans. Mach. Learn. Res., 2024

Steering Masked Discrete Diffusion Models via Discrete Denoising Posterior Prediction.

Jarrid Rector-Brooks, Mohsin Hasan, Zhangzhi Peng, Zachary Quinn, Cheng-Hao Liu, Sarthak Mittal, Nouha Dziri, Michael M. Bronstein, Yoshua Bengio, Pranam Chatterjee, Alexander Tong, Avishek Joey Bose

CoRR, 2024

Sequence-Augmented SE(3)-Flow Matching For Conditional Protein Backbone Generation.

Guillaume Huguet, James Vuckovic, Kilian Fatras, Eric Thibodeau-Laufer, Pablo Lemos, Riashat Islam, Cheng-Hao Liu, Jarrid Rector-Brooks, Tara Akhound-Sadegh, Michael M. Bronstein, Alexander Tong, Avishek Joey Bose

CoRR, 2024

Generative Active Learning for the Search of Small-molecule Protein Binders.

Maksym Korablyov, Cheng-Hao Liu, Moksh Jain, Almer M. van der Sloot, Eric Jolicoeur, Edward Ruediger, Andrei Cristian Nica, Emmanuel Bengio, Kostiantyn Lapchevskyi, Daniel St-Cyr, Doris Alexandra Schuetz, Victor Ion Butoi, Jarrid Rector-Brooks, Simon Blackburn, Leo Feng, Hadi Nekoei, Sai Krishna Gottipati, Priyesh Vijayan, Prateek Gupta, Ladislav Rampásek, Sasikanth Avancha, Pierre-Luc Bacon, William L. Hamilton, Brooks Paige, Sanchit Misra, Stanislaw Kamil Jastrzebski, Bharat Kaul, Doina Precup, José Miguel Hernández-Lobato, Marwin H. S. Segler, Michael M. Bronstein, Anne Marinier, Mike Tyers, Yoshua Bengio

CoRR, 2024

On diffusion models for amortized inference: Benchmarking and improving stochastic control and sampling.

Marcin Sendera, Minsu Kim, Sarthak Mittal, Pablo Lemos, Luca Scimeca, Jarrid Rector-Brooks, Alexandre Adam, Yoshua Bengio, Nikolay Malkin

CoRR, 2024

Amortizing intractable inference in diffusion models for vision, language, and control.

Siddarth Venkatraman, Moksh Jain, Luca Scimeca, Minsu Kim, Marcin Sendera, Mohsin Hasan, Luke Rowe, Sarthak Mittal, Pablo Lemos, Emmanuel Bengio, Alexandre Adam, Jarrid Rector-Brooks, Yoshua Bengio, Glen Berseth, Nikolay Malkin

Proceedings of the Advances in Neural Information Processing Systems 37: Annual Conference on Neural Information Processing Systems 2024, 2024

Improved off-policy training of diffusion samplers.

Marcin Sendera, Minsu Kim, Sarthak Mittal, Pablo Lemos, Luca Scimeca, Jarrid Rector-Brooks, Alexandre Adam, Yoshua Bengio, Nikolay Malkin

Proceedings of the Advances in Neural Information Processing Systems 37: Annual Conference on Neural Information Processing Systems 2024, 2024

Sequence-Augmented SE(3)-Flow Matching For Conditional Protein Generation.

Guillaume Huguet, James Vuckovic, Kilian Fatras, Eric Thibodeau-Laufer, Pablo Lemos, Riashat Islam, Cheng-Hao Liu, Jarrid Rector-Brooks, Tara Akhound-Sadegh, Michael M. Bronstein, Alexander Tong, Avishek Joey Bose

Proceedings of the Advances in Neural Information Processing Systems 37: Annual Conference on Neural Information Processing Systems 2024, 2024

Iterated Denoising Energy Matching for Sampling from Boltzmann Densities.

Tara Akhound-Sadegh, Jarrid Rector-Brooks, Avishek Joey Bose, Sarthak Mittal, Pablo Lemos, Cheng-Hao Liu, Marcin Sendera, Siamak Ravanbakhsh, Gauthier Gidel, Yoshua Bengio, Nikolay Malkin, Alexander Tong

Proceedings of the Forty-first International Conference on Machine Learning, 2024

SE(3)-Stochastic Flow Matching for Protein Backbone Generation.

Avishek Joey Bose, Tara Akhound-Sadegh, Guillaume Huguet, Kilian Fatras, Jarrid Rector-Brooks, Cheng-Hao Liu, Andrei Cristian Nica, Maksym Korablyov, Michael M. Bronstein, Alexander Tong

Proceedings of the Twelfth International Conference on Learning Representations, 2024

2023

DEUP: Direct Epistemic Uncertainty Prediction.

Salem Lahlou, Moksh Jain, Hadi Nekoei, Victor Butoi, Paul Bertin, Jarrid Rector-Brooks, Maksym Korablyov, Yoshua Bengio

Trans. Mach. Learn. Res., 2023

Thompson sampling for improved exploration in GFlowNets.

Jarrid Rector-Brooks, Kanika Madan, Moksh Jain, Maksym Korablyov, Cheng-Hao Liu, Sarath Chandar, Nikolay Malkin, Yoshua Bengio

CoRR, 2023

Conditional Flow Matching: Simulation-Free Dynamic Optimal Transport.

Alexander Tong, Nikolay Malkin, Guillaume Huguet, Yanlei Zhang, Jarrid Rector-Brooks, Kilian Fatras, Guy Wolf, Yoshua Bengio

CoRR, 2023

Learning GFlowNets From Partial Episodes For Improved Convergence And Stability.

Kanika Madan, Jarrid Rector-Brooks, Maksym Korablyov, Emmanuel Bengio, Moksh Jain, Andrei Cristian Nica, Tom Bosc, Yoshua Bengio, Nikolay Malkin

Proceedings of the International Conference on Machine Learning, 2023

Multi-Objective GFlowNets.

Moksh Jain, Sharath Chandra Raparthy, Alex Hernández-García, Jarrid Rector-Brooks, Yoshua Bengio, Santiago Miret, Emmanuel Bengio

Proceedings of the International Conference on Machine Learning, 2023

2022

RECOVER: sequential model optimization platform for combination drug repurposing identifies novel synergistic compounds in vitro.

Paul Bertin, Jarrid Rector-Brooks, Deepak Sharma, Thomas Gaudelet, Andrew Anighoro, Torsten Gross, Francisco Martinez-Pena, Eileen L. Tang, Suraj M. S, Cristian Regep, Jeremy B. R. Hayter, Maksym Korablyov, Nicholas Valiante, Almer van der Sloot, Mike Tyers, Charles Roberts, Michael M. Bronstein, Luke L. Lairson, Jake P. Taylor-King, Yoshua Bengio

CoRR, 2022

Biological Sequence Design with GFlowNets.

Moksh Jain, Emmanuel Bengio, Alex Hernández-García, Jarrid Rector-Brooks, Bonaventure F. P. Dossou, Chanakya Ajit Ekbote, Jie Fu, Tianyu Zhang, Michael Kilgour, Dinghuai Zhang, Lena Simine, Payel Das, Yoshua Bengio

Proceedings of the International Conference on Machine Learning, 2022

2019

Revisiting Projection-Free Optimization for Strongly Convex Constraint Sets.

Jarrid Rector-Brooks, Jun-Kun Wang, Barzan Mozafari

Proceedings of the Thirty-Third AAAI Conference on Artificial Intelligence, 2019