Jeffrey D. Varner

According to our database, Jeffrey D. Varner authored at least 17 papers between 2004 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

Synthetic American Option Pricing via Jump-HMM-Driven Heston Implied Volatility.

Julia Sun, Zheyu Jin, Jiawei Zhang, Jeffrey D. Varner

CoRR, May, 2026

Computational framework for multistep metabolic pathway design.

Peter Zhiping Zhang, Jeffrey D. Varner

CoRR, April, 2026

Validated Synthetic Patient Generation for Small Longitudinal Cohorts: Coagulation Dynamics Across Pregnancy.

Jeffrey D. Varner, Tereza Cristina M. B. Carvalho, Carole A. McBride, Thomas Orfeo, Ira Bernstein

CoRR, April, 2026

ParetoEnsembles.jl: A Julia Package for Multiobjective Parameter Estimation Using Pareto Optimal Ensemble Techniques.

Jeffrey D. Varner

CoRR, March, 2026

Conditioning Protein Generation via Hopfield Pattern Multiplicity.

Jeffrey D. Varner

CoRR, March, 2026

BSTModelKit.jl: A Julia Package for Constructing, Solving, and Analyzing Biochemical Systems Theory Models.

Sandra Vadhin, Jeffrey D. Varner

CoRR, March, 2026

Training-Free Generation of Protein Sequences from Small Family Alignments via Stochastic Attention.

Jeffrey D. Varner

CoRR, March, 2026

Hybrid Hidden Markov Model for Modeling Equity Excess Growth Rate Dynamics: A Discrete-State Approach with Jump-Diffusion.

Abdulrahman Alswaidan, Jeffrey D. Varner

CoRR, March, 2026

Stochastic Attention via Langevin Dynamics on the Modern Hopfield Energy.

Abdulrahman Alswaidan, Jeffrey D. Varner

CoRR, March, 2026

2018

Multi-scale computational study of the Warburg effect, reverse Warburg effect and glutamine addiction in solid tumors.

Mengrou Shan, David Dai, Arunodai Vudem, Jeffrey D. Varner, Abraham Duncan Stroock

PLoS Comput. Biol., 2018

Dynamic Optimization with Particle Swarms (DOPS): a meta-heuristic for parameter estimation in biochemical models.

Adithya Sagar, Rachel LeCover, Christine Ann Shoemaker, Jeffrey D. Varner

BMC Syst. Biol., 2018

2017

JuPOETs: a constrained multiobjective optimization approach to estimate biochemical model ensembles in the Julia programming language.

David M. Bassen, Michael Vilkhovoy, Mason Minot, Jonathan T. Butcher, Jeffrey D. Varner

BMC Syst. Biol., 2017

2016

Population Heterogeneity in the Epithelial to Mesenchymal Transition Is Controlled by NFAT and Phosphorylated Sp1.

Russell Gould, David M. Bassen, Anirikh Chakrabarti, Jeffrey D. Varner, Jonathan T. Butcher

PLoS Comput. Biol., 2016

2011

Computational Modeling and Analysis of Insulin Induced Eukaryotic Translation Initiation.

Joshua Lequieu, Anirikh Chakrabarti, Satyaprakash Nayak, Jeffrey D. Varner

PLoS Comput. Biol., 2011

2007

Computationally Derived Points of Fragility of a Human Cascade Are Consistent with Current Therapeutic Strategies.

Deyan Luan, Michael Zai, Jeffrey D. Varner

PLoS Comput. Biol., 2007

2005

Large-scale inference of the transcriptional regulation of Bacillus subtilis.

Anshuman Gupta, Jeffrey D. Varner, Costas D. Maranas

Comput. Chem. Eng., 2005

2004

A Mixed Integer Linear Programming (MILP) Framework for Inferring Time Delay in Gene Regulatory Networks.

Madhukar S. Dasika, Anshuman Gupta, Costas D. Maranas, Jeffrey D. Varner

Proceedings of the Biocomputing 2004, 2004