Jianyi Yang

Orcid: 0000-0003-2912-7737

According to our database1, Jianyi Yang authored at least 91 papers between 2008 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
RNA threading with secondary structure and sequence profile.
Bioinform., February, 2024

Online Allocation with Replenishable Budgets: Worst Case and Beyond.
Proc. ACM Meas. Anal. Comput. Syst., 2024

UCRI: A Unified Conversational Recommender System Based on Item-Guided Conditional Generation.
IEEE Intell. Syst., 2024

FeReX: A Reconfigurable Design of Multi-bit Ferroelectric Compute-in-Memory for Nearest Neighbor Search.
CoRR, 2024

2023
Traction Machine State Recognition Method Based on DPCA Algorithm and Convolution Neural Network.
Sensors, July, 2023

A unified approach to protein domain parsing with inter-residue distance matrix.
Bioinform., February, 2023

Reconfigurable Frequency Multipliers Based on Complementary Ferroelectric Transistors.
CoRR, 2023

Low Power and Temperature-Resilient Compute-In-Memory Based on Subthreshold-FeFET.
CoRR, 2023

CryoAlign: feature-based method for global and local 3D alignment of EM density maps.
CoRR, 2023

Towards Environmentally Equitable AI via Geographical Load Balancing.
CoRR, 2023

Learning-Augmented Decentralized Online Convex Optimization in Networks.
CoRR, 2023

Making AI Less "Thirsty": Uncovering and Addressing the Secret Water Footprint of AI Models.
CoRR, 2023

A Hybrid Solid-State Beam Scanner for FMCW LiDAR Application.
Proceedings of the Optical Fiber Communications Conference and Exhibition, 2023

8×250 Gbit/s PAM4 transmission over 1 km single mode fiber with an all-silicon LAN WDM transmitter.
Proceedings of the Optical Fiber Communications Conference and Exhibition, 2023

Anytime-Competitive Reinforcement Learning with Policy Prior.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

Robust Learning for Smoothed Online Convex Optimization with Feedback Delay.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

Robustified Learning for Online Optimization with Memory Costs.
Proceedings of the IEEE INFOCOM 2023, 2023

Learning for Edge-Weighted Online Bipartite Matching with Robustness Guarantees.
Proceedings of the International Conference on Machine Learning, 2023

SEE-MCAM: Scalable Multi-Bit FeFET Content Addressable Memories for Energy Efficient Associative Search.
Proceedings of the IEEE/ACM International Conference on Computer Aided Design, 2023

Learning-Assisted Algorithm Unrolling for Online Optimization with Budget Constraints.
Proceedings of the Thirty-Seventh AAAI Conference on Artificial Intelligence, 2023

2022
On Monomeric and Multimeric Structures-Based Protein-Ligand Interactions.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

Research on State Recognition Technology of Elevator Traction Machine Based on Modulation Feature Extraction.
Sensors, 2022

Expert-Calibrated Learning for Online Optimization with Switching Costs.
Proc. ACM Meas. Anal. Comput. Syst., 2022

Improving QoE of Deep Neural Network Inference on Edge Devices: A Bandit Approach.
IEEE Internet Things J., 2022

Toward the assessment of predicted inter-residue distance.
Bioinform., 2022

BiCAPT: Bidirectional Computer-Assisted Pronunciation Training with Normalizing Flows.
Proceedings of the Interspeech 2022, 2022

End-to-end Mispronunciation Detection with Simulated Error Distance.
Proceedings of the Interspeech 2022, 2022

Learning for Robust Combinatorial Optimization: Algorithm and Application.
Proceedings of the IEEE INFOCOM 2022, 2022

Informed Learning by Wide Neural Networks: Convergence, Generalization and Sampling Complexity.
Proceedings of the International Conference on Machine Learning, 2022

Masked Acoustic Unit for Mispronunciation Detection and Correction.
Proceedings of the IEEE International Conference on Acoustics, 2022

2021
RNA Flexibility Prediction With Sequence Profile and Predicted Solvent Accessibility.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021

Text-conditioned Transformer for automatic pronunciation error detection.
Speech Commun., 2021

Accent Recognition with Hybrid Phonetic Features.
Sensors, 2021

CMBF: Cross-Modal-Based Fusion Recommendation Algorithm.
Sensors, 2021

Emotion Recognition Based on Skin Potential Signals with a Portable Wireless Device.
Sensors, 2021

One Proxy Device Is Enough for Hardware-Aware Neural Architecture Search.
Proc. ACM Meas. Anal. Comput. Syst., 2021

Mispronunciation Detection and Correction via Discrete Acoustic Units.
CoRR, 2021

Accent Recognition with Hybrid Phonetic Features.
CoRR, 2021

Improved estimation of model quality using predicted inter-residue distance.
Bioinform., 2021

RNA inter-nucleotide 3D closeness prediction by deep residual neural networks.
Bioinform., 2021

Recognition of small molecule-RNA binding sites using RNA sequence and structure.
Bioinform., 2021

Human host status inference from temporal microbiome changes via recurrent neural networks.
Briefings Bioinform., 2021

Bandit Learning with Predicted Context: Regret Analysis and Selective Context Query.
Proceedings of the 40th IEEE Conference on Computer Communications, 2021

Contextual Bandits with Delayed Feedback and Semi-supervised Learning (Student Abstract).
Proceedings of the Thirty-Fifth AAAI Conference on Artificial Intelligence, 2021

Robust Bandit Learning with Imperfect Context.
Proceedings of the Thirty-Fifth AAAI Conference on Artificial Intelligence, 2021

2020
Deep quantised portrait matting.
IET Comput. Vis., 2020

A Quantitative Perspective on Values of Domain Knowledge for Machine Learning.
CoRR, 2020

Scaling Up Deep Neural Network Optimization for Edge Inference.
CoRR, 2020

Calibrating Deep Neural Network Classifiers on Out-of-Distribution Datasets.
CoRR, 2020

Protein contact prediction using metagenome sequence data and residual neural networks.
Bioinform., 2020

CATHER: a novel threading algorithm with predicted contacts.
Bioinform., 2020

Multi-Feedback Bandit Learning with Probabilistic Contexts.
Proceedings of the Twenty-Ninth International Joint Conference on Artificial Intelligence, 2020

Increasing the Trustworthiness of Deep Neural Networks via Accuracy Monitoring.
Proceedings of the Workshop on Artificial Intelligence Safety 2020 co-located with the 29th International Joint Conference on Artificial Intelligence and the 17th Pacific Rim International Conference on Artificial Intelligence (IJCAI-PRICAI 2020), 2020

Poster: Scaling Up Deep Neural Network optimization for Edge Inference†.
Proceedings of the 5th IEEE/ACM Symposium on Edge Computing, 2020

2019
Enhanced prediction of RNA solvent accessibility with long short-term memory neural networks and improved sequence profiles.
Bioinform., 2019

Improving the prediction of protein-nucleic acids binding residues via multiple sequence profiles and the consensus of complementary methods.
Bioinform., 2019

User Clustering and Scheduling in UAV Systems Exploiting Channel Correlation.
Proceedings of the 30th IEEE Annual International Symposium on Personal, 2019

Automating Deep Neural Network Model Selection for Edge Inference.
Proceedings of the 2019 IEEE First International Conference on Cognitive Machine Intelligence (CogMI), 2019

2018
COACH-D: improved protein-ligand binding sites prediction with refined ligand-binding poses through molecular docking.
Nucleic Acids Res., 2018

mTM-align: a server for fast protein structure database search and multiple protein structure alignment.
Nucleic Acids Res., 2018

Improving Sequence-Based Prediction of Protein-Peptide Binding Residues by Introducing Intrinsic Disorder and a Consensus Method.
J. Chem. Inf. Model., 2018

Spatial Graph Convolutions for Drug Discovery.
CoRR, 2018

CoABind: a novel algorithm for Coenzyme A (CoA)- and CoA derivatives-binding residues prediction.
Bioinform., 2018

mTM-align: an algorithm for fast and accurate multiple protein structure alignment.
Bioinform., 2018

A large-scale comparative assessment of methods for residue-residue contact prediction.
Briefings Bioinform., 2018

Bandwidth Tunable Filter with Large Bandwidth and Wavelength Tuning Range.
Proceedings of the Optical Fiber Communications Conference and Exposition, 2018

2017
Structural and Sequence Similarity Makes a Significant Impact on Machine-Learning-Based Scoring Functions for Protein-Ligand Interactions.
J. Chem. Inf. Model., 2017

An ensemble approach to protein fold classification by integration of template-based assignment and support vector machine classifier.
Bioinform., 2017

DLTree: efficient and accurate phylogeny reconstruction using the dynamical language method.
Bioinform., 2017

Correlation Based Adaptive Compressed Sensing for Millimeter Wave Channel Estimation.
Proceedings of the 2017 IEEE Wireless Communications and Networking Conference, 2017

Robot as a Service in Information Science & Electronic Engineering Education.
Proceedings of the 13th IEEE International Symposium on Autonomous Decentralized System, 2017

2016
Recognizing metal and acid radical ion-binding sites by integrating <i>ab initio</i> modeling with template-based transferals.
Bioinform., 2016

Enhanced multi-resolution hierarchical codebook design for adaptive compressed sensing based millimeter wave channel estimation.
Proceedings of the 2016 IEEE/CIC International Conference on Communications in China, 2016

2015
I-TASSER server: new development for protein structure and function predictions.
Nucleic Acids Res., 2015

An improved ant colony optimization (I-ACO) method for the quasi travelling salesman problem (Quasi-TSP).
Int. J. Geogr. Inf. Sci., 2015

Regional-scale calculation of the LS factor using parallel processing.
Comput. Geosci., 2015

GLASS: a comprehensive database for experimentally validated GPCR-ligand associations.
Bioinform., 2015

Photonic-assisted microwave frequency doubling based on silicon ring modulator.
Proceedings of the Optical Fiber Communications Conference and Exhibition, 2015

2014
On Reducing Insertion Loss in Wavelength-Routed Optical Network-on-Chip Architecture.
JOCN, 2014

2013
BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions.
Nucleic Acids Res., 2013

An intelligent method to discover transition rules for cellular automata using bee colony optimisation.
Int. J. Geogr. Inf. Sci., 2013

A cellular automata model for simulating the evolution of positive-negative terrains in a small loess watershed.
Int. J. Geogr. Inf. Sci., 2013

Parallel contributing area calculation with granularity control on massive grid terrain datasets.
Comput. Geosci., 2013

Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment.
Bioinform., 2013

2012
COFACTOR: an accurate comparative algorithm for structure-based protein function annotation.
Nucleic Acids Res., 2012

2011
A Consensus Approach to Predicting Protein Contact Map via Logistic Regression.
Proceedings of the Bioinformatics Research and Applications - 7th International Symposium, 2011

2010
Constructing Consensus Genetic Maps in Comparative Analysis.
J. Comput. Biol., 2010

Prediction of protein structural classes for low-homology sequences based on predicted secondary structure.
BMC Bioinform., 2010

An improved classification of G-protein-coupled receptors using sequence-derived features.
BMC Bioinform., 2010

2008
Human Pol II promoter recognition based on primary sequences and free energy of dinucleotides.
BMC Bioinform., 2008

Protein Structure Classification Based on Chaos Game Representation and Multifractal Analysis.
Proceedings of the Fourth International Conference on Natural Computation, 2008


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