Jim Shaw

According to our database, Jim Shaw authored at least 7 papers between 2022 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Devider: Long-Read Reconstruction of Many Diverse Haplotypes.

Jim Shaw, Christina Boucher, Yun William Yu, Noelle R. Noyes, Heng Li

Proceedings of the Research in Computational Molecular Biology, 2025

2024

Mora: abundance aware metagenomic read re-assignment for disentangling similar strains.

Andrew Zheng, Jim Shaw, Yun William Yu

BMC Bioinform., December, 2024

skandiver: a divergence-based analysis tool for identifying intercellular mobile genetic elements.

Xiaolei Brian Zhang, Grace Oualline, Jim Shaw, Yun William Yu

Bioinform., 2024

Floria: fast and accurate strain haplotyping in metagenomes.

Jim Shaw, Jean-Sébastien Gounot, Hanrong Chen, Niranjan Nagarajan, Yun William Yu

Bioinform., 2024

2023

How to optimally sample a sequence for rapid analysis.

Martin C. Frith, Jim Shaw, John L. Spouge

Bioinform., February, 2023

2022

Theory of local k-mer selection with applications to long-read alignment.

Jim Shaw, Yun William Yu

Bioinform., October, 2022

flopp: Extremely Fast Long-Read Polyploid Haplotype Phasing by Uniform Tree Partitioning.

Jim Shaw, Yun William Yu

J. Comput. Biol., 2022