Jinyan Li

According to our database1, Jinyan Li
  • authored at least 142 papers between 1998 and 2018.
  • has a "Dijkstra number"2 of four.

Timeline

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Bibliography

2018
Adaptive multi-objective swarm fusion for imbalanced data classification.
Information Fusion, 2018

2017
Exploring Consensus RNA Substructural Patterns Using Subgraph Mining.
IEEE/ACM Trans. Comput. Biology Bioinform., 2017

Using propensity scores to predict the kinases of unannotated phosphopeptides.
Knowl.-Based Syst., 2017

Septic shock prediction for ICU patients via coupled HMM walking on sequential contrast patterns.
Journal of Biomedical Informatics, 2017

Cross disease analysis of co-functional microRNA pairs on a reconstructed network of disease-gene-microRNA tripartite.
BMC Bioinformatics, 2017

High-speed and high-ratio referential genome compression.
Bioinformatics, 2017

Structure embedding for knowledge base completion and analytics.
Proceedings of the 2017 International Joint Conference on Neural Networks, 2017

2016
Improving the classification performance of biological imbalanced datasets by swarm optimization algorithms.
The Journal of Supercomputing, 2016

Hypotension Risk Prediction via Sequential Contrast Patterns of ICU Blood Pressure.
IEEE J. Biomedical and Health Informatics, 2016

A Sequence-Based Dynamic Ensemble Learning System for Protein Ligand-Binding Site Prediction.
IEEE/ACM Trans. Comput. Biology Bioinform., 2016

Hierarchical classification in text mining for sentiment analysis of online news.
Soft Comput., 2016

Eidetic Wolf Search Algorithm with a global memory structure.
European Journal of Operational Research, 2016

Grouping miRNAs of similar functions via weighted information content of gene ontology.
BMC Bioinformatics, 2016

Adaptive swarm cluster-based dynamic multi-objective synthetic minority oversampling technique algorithm for tackling binary imbalanced datasets in biomedical data classification.
BioData Mining, 2016

Coordinating Discernibility and Independence Scores of Variables in a 2D Space for Efficient and Accurate Feature Selection.
Proceedings of the Intelligent Computing Methodologies - 12th International Conference, 2016

Depth-First Search Encoding of RNA Substructures.
Proceedings of the Intelligent Computing Theories and Application, 2016

Using constrained information entropy to detect rare adverse drug reactions from medical forums.
Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016

Predicting short-term ICU outcomes using a sequential contrast motif based classification framework.
Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016

Efficient Mining of Pan-Correlation Patterns from Time Course Data.
Proceedings of the Advanced Data Mining and Applications - 12th International Conference, 2016

Adaptive Multi-objective Swarm Crossover Optimization for Imbalanced Data Classification.
Proceedings of the Advanced Data Mining and Applications - 12th International Conference, 2016

Deriving Public Sector Workforce Insights: A Case Study Using Australian Public Sector Employment Profiles.
Proceedings of the Advanced Data Mining and Applications - 12th International Conference, 2016

2015
Burial Level Change Defines a High Energetic Relevance for Protein Binding Interfaces.
IEEE/ACM Trans. Comput. Biology Bioinform., 2015

Automatic classification for field crop insects via multiple-task sparse representation and multiple-kernel learning.
Computers and Electronics in Agriculture, 2015

Laplacian normalization and random walk on heterogeneous networks for disease-gene prioritization.
Computational Biology and Chemistry, 2015

Connecting rules from paired miRNA and mRNA expression data sets of HCV patients to detect both inverse and positive regulatory relationships.
BMC Genomics, 2015

A Joint Optimization Framework of Sparse Coding and Discriminative Clustering.
Proceedings of the Twenty-Fourth International Joint Conference on Artificial Intelligence, 2015

Design Optimization for Cloud Application Migration and Remigration.
Proceedings of the Fifth IEEE International Conference on Big Data and Cloud Computing, 2015

Optimal Fault Tolerance Strategy Selection for Application Migration in Federated Hybrid Cloud.
Proceedings of the Fifth IEEE International Conference on Big Data and Cloud Computing, 2015

2014
Coupling Graphs, Efficient Algorithmsand B-Cell Epitope Prediction.
IEEE/ACM Trans. Comput. Biology Bioinform., 2014

Influenza A HA's conserved epitopes and broadly neutralizing antibodies: A prediction method.
J. Bioinformatics and Computational Biology, 2014

Feature Selection in Life Science Classification: Metaheuristic Swarm Search.
IT Professional, 2014

PPI-IRO: a two-stage method for protein-protein interaction extraction based on interaction relation ontology.
IJDMB, 2014

Bird Flu Outbreak Prediction via Satellite Tracking.
IEEE Intelligent Systems, 2014

Polyline-sourced Geodesic Voronoi Diagrams on Triangle Meshes.
Comput. Graph. Forum, 2014

Use B-factor related features for accurate classification between protein binding interfaces and crystal packing contacts.
BMC Bioinformatics, 2014

Integrating water exclusion theory into βcontacts to predict binding free energy changes and binding hot spots.
BMC Bioinformatics, 2014

Tertiary structure-based prediction of conformational B-cell epitopes through B factors.
Bioinformatics, 2014

Geodesic Voronoi Diagrams with Polyline Generators.
Proceedings of the 2014 Eurographics Symposium on Geometry Processing - Posters, 2014

Modeling Asymmetry and Tail Dependence among Multiple Variables by Using Partial Regular Vine.
Proceedings of the 2014 SIAM International Conference on Data Mining, 2014

Risk Prediction for Acute Hypotensive Patients by Using Gap Constrained Sequential Contrast Patterns.
Proceedings of the AMIA 2014, 2014

2013
Binding Affinity Prediction for Protein-Ligand Complexes Based on β Contacts and B Factor.
Journal of Chemical Information and Modeling, 2013

Structural analysis on mutation residues and interfacial water molecules for human TIM disease understanding.
BMC Bioinformatics, 2013

Optimal Allocation of High Dimensional Assets through Canonical Vines.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2013

Emerging Pattern Based Rules Characterizing Subtypes of Leukemia.
Proceedings of the Contrast Data Mining: Concepts, Algorithms, and Applications, 2013

2012
Detection of Outlier Residues for Improving Interface Prediction in Protein Heterocomplexes.
IEEE/ACM Trans. Comput. Biology Bioinform., 2012

Conservation of water molecules in protein binding interfaces.
IJBRA, 2012

B-cell epitope prediction through a graph model.
BMC Bioinformatics, 2012

Progressive dry-core-wet-rim hydration trend in a nested-ring topology of protein binding interfaces.
BMC Bioinformatics, 2012

Model the complex dependence structures of financial variables by using canonical vine.
Proceedings of the 21st ACM International Conference on Information and Knowledge Management, 2012

2011
Mining Iterative Generators and Representative Rules for Software Specification Discovery.
IEEE Trans. Knowl. Data Eng., 2011

Antibody-Specified B-Cell Epitope Prediction in Line with the Principle of Context-Awareness.
IEEE/ACM Trans. Comput. Biology Bioinform., 2011

Exploring the wild birds' migration data for the disease spread study of H5N1: a clustering and association approach.
Knowl. Inf. Syst., 2011

A case study on financial ratios via cross-graph quasi-bicliques.
Inf. Sci., 2011

DBAC: A simple prediction method for protein binding hot spots based on burial levels and deeply buried atomic contacts.
BMC Systems Biology, 2011

Structural analysis of the hot spots in the binding between H1N1 HA and the 2D1 antibody: do mutations of H1N1 from 1918 to 2009 affect much on this binding?
Bioinformatics, 2011

The development approaches and research of uniform rules language designer.
Proceedings of the IEEE International Conference on Automation and Logistics, 2011

2010
Modeling Protein Interacting Groups by Quasi-Bicliques: Complexity, Algorithm, and Application.
IEEE/ACM Trans. Comput. Biology Bioinform., 2010

Insights into Bacterial Genome Composition through Variable Target GC Content Profiling.
Journal of Computational Biology, 2010

Pattern Space Maintenance for Data Updates and Interactive Mining.
Computational Intelligence, 2010

Discovering conditional co-regulated protein complexes by integrating diverse data sources.
BMC Systems Biology, 2010

Protein binding hot spots and the residue-residue pairing preference: a water exclusion perspective.
BMC Bioinformatics, 2010

Sequence-based identification of interface residues by an integrative profile combining hydrophobic and evolutionary information.
BMC Bioinformatics, 2010

Negative correlations in collaboration: concepts and algorithms.
Proceedings of the 16th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2010

Birds Bring Flues? Mining Frequent and High Weighted Cliques from Birds Migration Networks.
Proceedings of the Database Systems for Advanced Applications, 2010

2009
Emerging Patterns.
Proceedings of the Encyclopedia of Database Systems, 2009

Emerging Pattern Based Classification.
Proceedings of the Encyclopedia of Database Systems, 2009

Applications of Emerging Patterns for Microarray Gene Expression Data Analysis.
Proceedings of the Encyclopedia of Database Systems, 2009

Discovery of Protein Interaction Sites.
Proceedings of the Encyclopedia of Data Warehousing and Mining, Second Edition (4 Volumes), 2009

Data-Aided Synchronization for MF-TDMA Multi-Carrier Demultiplexer/Demodulator (MCDD).
TBC, 2009

Mining maximal quasi-bicliques: Novel algorithm and applications in the stock market and protein networks.
Statistical Analysis and Data Mining, 2009

Efficient mining of distance-based subspace clusters.
Statistical Analysis and Data Mining, 2009

PADS: a simple yet effective pattern-aware dynamic search method for fast maximal frequent pattern mining.
Knowl. Inf. Syst., 2009

'Double water exclusion': a hypothesis refining the O-ring theory for the hot spots at protein interfaces.
Bioinformatics, 2009

High Functional Coherence in k-Partite Protein Cliques of Protein Interaction Networks.
Proceedings of the 2009 IEEE International Conference on Bioinformatics and Biomedicine, 2009

Discovery of Migration Habitats and Routes of Wild Bird Species by Clustering and Association Analysis.
Proceedings of the Advanced Data Mining and Applications, 5th International Conference, 2009

2008
Performance Analysis of MF-TDMA Multi-Carrier Demultiplexer/Demodulators (MCDDs) in the Presence of Critical Degrading Factors.
TBC, 2008

A new concise representation of frequent itemsets using generators and a positive border.
Knowl. Inf. Syst., 2008

Mining and Ranking Generators of Sequential Patterns.
Proceedings of the SIAM International Conference on Data Mining, 2008

Maximal Quasi-Bicliques with Balanced Noise Tolerance: Concepts and Co-clustering Applications.
Proceedings of the SIAM International Conference on Data Mining, 2008

Quasi-bicliques: Complexity and Binding Pairs.
Proceedings of the Computing and Combinatorics, 14th Annual International Conference, 2008

Interacting Amino Acid Preferences of 3D Pattern Pairs at the Binding Sites of Transient and Obligate Protein Complexes.
Proceedings of the 6th Asia-Pacific Bioinformatics Conference, 2008

Negative Generator Border for Effective Pattern Maintenance.
Proceedings of the Advanced Data Mining and Applications, 4th International Conference, 2008

2007
Maximal Biclique Subgraphs and Closed Pattern Pairs of the Adjacency Matrix: A One-to-One Correspondence and Mining Algorithms.
IEEE Trans. Knowl. Data Eng., 2007

Strong Compound-Risk Factors: Efficient Discovery Through Emerging Patterns and Contrast Sets.
IEEE Trans. Information Technology in Biomedicine, 2007

Discovering Patterns of DNA Methylation: Rule Mining with Rough Sets and Decision Trees, and Comethylation Analysis.
Proceedings of the Pattern Recognition and Machine Intelligence, 2007

Multidimensional Decision Support Indicator (mDSI) for Time Series Stock Trend Prediction.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2007

Workshop BioDM'07 - An Overview.
Proceedings of the Emerging Technologies in Knowledge Discovery and Data Mining, 2007

Evolution and Maintenance of Frequent Pattern Space When Transactions Are Removed.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2007

Mining statistically important equivalence classes and delta-discriminative emerging patterns.
Proceedings of the 13th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2007

Distance Based Subspace Clustering with Flexible Dimension Partitioning.
Proceedings of the 23rd International Conference on Data Engineering, 2007

2006
Discovering motif pairs at interaction sites from protein sequences on a proteome-wide scale.
Bioinformatics, 2006

Positive Borders or Negative Borders: How to Make Lossless Generator Based Representations Concise.
Proceedings of the Sixth SIAM International Conference on Data Mining, 2006

Bayesian Approaches to Ranking Sequential Patterns Interestingness.
Proceedings of the PRICAI 2006: Trends in Artificial Intelligence, 2006

Mining Temporal Indirect Associations.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2006

Mining Maximal Quasi-Bicliques to Co-Cluster Stocks and Financial Ratios for Value Investment.
Proceedings of the 6th IEEE International Conference on Data Mining (ICDM 2006), 2006

Performance Analysis of MF-TDMA Multi-Carrier Demultiplexer/Demodulators (MCDs) in the Presence of Critical Degrading Factors.
Proceedings of the Global Telecommunications Conference, 2006. GLOBECOM '06, San Francisco, CA, USA, 27 November, 2006

Efficient Mining of Large Maximal Bicliques.
Proceedings of the Data Warehousing and Knowledge Discovery, 8th International Conference, 2006

COWES: Clustering Web Users Based on Historical Web Sessions.
Proceedings of the Database Systems for Advanced Applications, 2006

Minimum Description Length Principle: Generators Are Preferable to Closed Patterns.
Proceedings of the Proceedings, 2006

2005
Using Fixed Point Theorems to Model the Binding in Protein-Protein Interactions.
IEEE Trans. Knowl. Data Eng., 2005

Efficient selection of discriminative genes from microarray gene expression data for cancer diagnosis.
IEEE Trans. on Circuits and Systems, 2005

Mining border descriptions of emerging patterns from dataset pairs.
Knowl. Inf. Syst., 2005

Structural geography of the space of emerging patterns.
Intell. Data Anal., 2005

Guest Editors' Introduction: Data Mining in Bioinformatics.
IEEE Intelligent Systems, 2005

Use of extreme patient samples for outcome prediction from gene expression data.
Bioinformatics, 2005

DNAFSMiner: a web-based software toolbox to recognize two types of functional sites in DNA sequences.
Bioinformatics, 2005

Discovery of stable and significant binding motif pairs from PDB complexes and protein interaction datasets.
Bioinformatics, 2005

Relative risk and odds ratio: a data mining perspective.
Proceedings of the Twenty-fourth ACM SIGACT-SIGMOD-SIGART Symposium on Principles of Database Systems, 2005

A Correspondence Between Maximal Complete Bipartite Subgraphs and Closed Patterns.
Proceedings of the Knowledge Discovery in Databases: PKDD 2005, 2005

Mining Succinct Systems of Minimal Generators of Formal Concepts.
Proceedings of the Database Systems for Advanced Applications, 2005

Diagnostic Rules Induced by an Ensemble Method for Childhood Leukemia.
Proceedings of the Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 2005

2004
DeEPs: A New Instance-Based Lazy Discovery and Classification System.
Machine Learning, 2004

Using amino acid patterns to accurately predict translation initiation sites.
In Silico Biology, 2004

Incremental Maintenance on the Border of the Space of Emerging Patterns.
Data Min. Knowl. Discov., 2004

Twelve C2H2 zinc-finger genes on human chromosome 19 can be each translated into the same type of protein after frameshifts.
Bioinformatics, 2004

Feature Space Transformation for Better Understanding Biological and Medical Classifications.
Journal of Research and Practice in Information Technology, 2004

Discovery of Binding Motif Pairs from Protein Complex Structural Data and Protein Interaction Sequence Data.
Proceedings of the Biocomputing 2004, 2004

A Tree-Based Approach to the Discovery of Diagnostic Biomarkers for Ovarian Cancer.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2004

Selection of Patient Samples and Genes for Outcome Prediction.
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

Use of Built-in Features in the Interpretation of High-dimensional Cancer Diagnosis Data..
Proceedings of the Second Asia-Pacific Bioinformatics Conference (APBC 2004), 2004

2003
Simple rules underlying gene expression profiles of more than six subtypes of acute lymphoblastic leukemia (ALL) patients.
Bioinformatics, 2003

Using Rules to Analyse Bio-medical Data: A Comparison between C4.5 and PCL.
Proceedings of the Advances in Web-Age Information Management, 2003

Mean-entropy discretized features are effective for classifying high-dimensional biomedical data.
Proceedings of the 3nd ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2003), 2003

Bioinformatics Adventures in Database Research.
Proceedings of the Database Theory, 2003

Ensembles of Cascading Trees.
Proceedings of the 3rd IEEE International Conference on Data Mining (ICDM 2003), 2003

Discovery of significant rules for classifying cancer diagnosis data.
Proceedings of the European Conference on Computational Biology (ECCB 2003), 2003

Feature Space Transformation and Decision Results Interpretation.
Proceedings of the First Asia-Pacific Bioinformatics Conference (APBC 2003), 2003

From Informatics to Bioinformatics.
Proceedings of the First Asia-Pacific Bioinformatics Conference (APBC 2003), 2003

2002
Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns .
Bioinformatics, 2002

Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns.
Bioinformatics, 2002

Geography of Differences between Two Classes of Data.
Proceedings of the Principles of Data Mining and Knowledge Discovery, 2002

Solving the Fragmentation Problem of Decision Trees by Discovering Boundary Emerging Patterns.
Proceedings of the 2002 IEEE International Conference on Data Mining (ICDM 2002), 2002

2001
Making Use of the Most Expressive Jumping Emerging Patterns for Classification.
Knowl. Inf. Syst., 2001

Combining the Strength of Pattern Frequency and Distance for Classification.
Proceedings of the Knowledge Discovery and Data Mining, 2001

2000
Instance-Based Classification by Emerging Patterns.
Proceedings of the Principles of Data Mining and Knowledge Discovery, 2000

Making Use of the Most Expressive Jumping Emerging Patterns for Classification.
Proceedings of the Knowledge Discovery and Data Mining, 2000

The Space of Jumping Emerging Patterns and Its Incremental Maintenance Algorithms.
Proceedings of the Seventeenth International Conference on Machine Learning (ICML 2000), Stanford University, Stanford, CA, USA, June 29, 2000

Emerging Patterns and Classification.
Proceedings of the Advances in Computing Science, 2000

1999
Efficient Mining of High Confidience Association Rules without Support Thresholds.
Proceedings of the Principles of Data Mining and Knowledge Discovery, 1999

Efficient Mining of Emerging Patterns: Discovering Trends and Differences.
Proceedings of the Fifth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 1999

CAEP: Classification by Aggregating Emerging Patterns.
Proceedings of the Discovery Science, 1999

1998
Interestingness of Discovered Association Rules in Terms of Neighborhood-Based Unexpectedness.
Proceedings of the Research and Development in Knowledge Discovery and Data Mining, 1998


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