Johan T. den Dunnen

According to our database, Johan T. den Dunnen authored at least 10 papers between 2008 and 2021.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2021

Mutalyzer 2: next generation HGVS nomenclature checker.

Mihai Lefter, Jonathan K. Vis, Martijn Vermaat, Johan T. den Dunnen, Peter E. M. Taschner, Jeroen F. J. Laros

Bioinform., 2021

2015

Finding Novel Associations Across Domains Using Linked Data: a Case Study on Genetic Variants Disrupting Transcription Start Sites.

Eelke van der Horst, Rajaram Kaliyaperumal, Zuotian Tatum, Mark Thompson, Erik A. Schultes, Eleni Mina, Ivo Fokkema, Johan T. den Dunnen, Marco Roos, Jeroen F. J. Laros, Barend Mons, Kristina M. Hettne, Peter A. C. 't Hoen

Proceedings of the 8th Semantic Web Applications and Tools for Life Sciences International Conference, 2015

2014

TSSV: a tool for characterization of complex allelic variants in pure and mixed genomes.

Seyed Yahya Anvar, Kristiaan J. van der Gaag, Jaap W. F. van der Heijden, Marcel H. A. M. Veltrop, Rolf H. A. M. Vossen, Rick H. de Leeuw, Cor Breukel, Henk P. J. Buermans, J. Sjef Verbeek, Peter de Knijff, Johan T. den Dunnen, Jeroen F. J. Laros

Bioinform., 2014

2011

mRNA degradation controls differentiation state-dependent differences in transcript and splice variant abundance.

Peter A. C. 't Hoen, Michael Hirsch, Emile J. de Meijer, Renée X. de Menezes, Gert-Jan B. van Ommen, Johan T. den Dunnen

Nucleic Acids Res., 2011

A formalized description of the standard human variant nomenclature in Extended Backus-Naur Form.

Jeroen F. J. Laros, André Blavier, Johan T. den Dunnen, Peter E. M. Taschner

BMC Bioinform., 2011

Literature-aided interpretation of gene expression data with the weighted global test.

Rob Jelier, Jelle J. Goeman, Kristina M. Hettne, Martijn J. Schuemie, Johan T. den Dunnen, Peter A. C. 't Hoen

Briefings Bioinform., 2011

CLI-mate: an interface generator for command line programs.

Zuotian Tatum, Johan T. den Dunnen, Jeroen F. J. Laros

Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences, 2011

2008

Microarray retriever: a web-based tool for searching and large scale retrieval of public microarray data.

Alexander E. Ivliev, Peter A. C. 't Hoen, Michel P. Villerius, Johan T. den Dunnen, Bernd W. Brandt

Nucleic Acids Res., 2008

Literature-aided meta-analysis of microarray data: a compendium study on muscle development and disease.

Rob Jelier, Peter A. C. 't Hoen, Ellen Sterrenburg, Johan T. den Dunnen, Gert-Jan B. van Ommen, Jan A. Kors, Barend Mons

BMC Bioinform., 2008

CORE_TF: a user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated genes.

Matthew S. Hestand, Michiel van Galen, Michel P. Villerius, Gert-Jan B. van Ommen, Johan T. den Dunnen, Peter A. C. 't Hoen

BMC Bioinform., 2008