John B. Hogenesch

According to our database, John B. Hogenesch authored at least 10 papers between 2008 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

An <i>in silico</i> genome-wide screen for circadian clock strength in human samples.

Gang Wu, Marc D. Ruben, Lauren J. Francey, Yin Yeng Lee, Ron C. Anafi, John B. Hogenesch

Bioinform., December, 2022

2021

Normalized coefficient of variation (nCV): a method to evaluate circadian clock robustness in population scale data.

Gang Wu, Lauren J. Francey, Marc D. Ruben, John B. Hogenesch

Bioinform., 2021

2016

MetaCycle: an integrated R package to evaluate periodicity in large scale data.

Gang Wu, Ron C. Anafi, Michael Hughes, Karl Kornacker, John B. Hogenesch

Bioinform., 2016

2015

Benchmark analysis of algorithms for determining and quantifying full-length mRNA splice forms from RNA-seq data.

Katharina E. Hayer, Angel D. Pizarro, Nicholas F. Lahens, John B. Hogenesch, Gregory R. Grant

Bioinform., 2015

2013

CircaDB: a database of mammalian circadian gene expression profiles.

Angel D. Pizarro, Katharina Hayer, Nicholas F. Lahens, John B. Hogenesch

Nucleic Acids Res., 2013

Design and analysis of large-scale biological rhythm studies: a comparison of algorithms for detecting periodic signals in biological data.

Anastasia Deckard, Ron C. Anafi, John B. Hogenesch, Steven B. Haase, John Harer

Bioinform., 2013

2011

Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM).

Gregory R. Grant, Michael H. Farkas, Angel D. Pizarro, Nicholas F. Lahens, Jonathan Schug, Brian P. Brunk, Christian J. Stoeckert Jr., John B. Hogenesch, Eric A. Pierce

Bioinform., 2011

2010

The Gene Wiki: community intelligence applied to human gene annotation.

Jon W. Huss III, Pierre Lindenbaum, Michael Martone, Donabel Roberts, Angel D. Pizarro, Faramarz Valafar, John B. Hogenesch, Andrew I. Su

Nucleic Acids Res., 2010

2008

NetAtlas: A Cytoscape Plugin to Examine Signaling Networks Based on Tissue Gene Expression.

Longlong Yang, John R. Walker, John B. Hogenesch, Russell S. Thomas

Silico Biol., 2008

WAVECLOCK: wavelet analysis of circadian oscillation.

Tom S. Price, Julie E. Baggs, Anne M. Curtis, Garret A. FitzGerald, John B. Hogenesch

Bioinform., 2008