Andrew I. Su

Orcid: 0000-0002-9859-4104

According to our database1, Andrew I. Su authored at least 43 papers between 2006 and 2023.

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Bibliography

2023
Schema Playground: a tool for authoring, extending, and using metadata schemas to improve FAIRness of biomedical data.
BMC Bioinform., December, 2023

BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs.
Bioinform., September, 2023

2022
Design and application of a knowledge network for automatic prioritization of drug mechanisms.
Bioinform., 2022

BioThings SDK: a toolkit for building high-performance data APIs in biomedical research.
Bioinform., 2022

2020
Applying citizen science to gene, drug and disease relationship extraction from biomedical abstracts.
Bioinform., 2020

Structured reviews for data and knowledge-driven research.
Database J. Biol. Databases Curation, 2020

2019
Aligning Needs: Integrating Citizen Science Efforts into Schools Through Service Requirements.
Hum. Comput., 2019

Time-resolved evaluation of compound repositioning predictions on a text-mined knowledge network.
BMC Bioinform., 2019

ChlamBase: a curated model organism database for the Chlamydia research community.
Database J. Biol. Databases Curation, 2019

ChlamBase: a curated model organism database for the Chlamydia research community.
Database J. Biol. Databases Curation, 2019

Applying Citizen Science to Gene, Drug, Disease Relationship Extraction from Biomedical Abstracts.
Proceedings of the 1st Conference on Automated Knowledge Base Construction, 2019

2018
The Healthy Pregnancy Research Program: transforming pregnancy research through a ResearchKit app.
npj Digit. Medicine, 2018

Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration.
BMC Bioinform., 2018

Wikidata as an intuitive resource towards semantic data modeling in data FAIRification.
Proceedings of the 11th International Conference Semantic Web Applications and Tools for Life Sciences, 2018

2017
WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata.
Database J. Biol. Databases Curation, 2017

2016
BioGPS: building your own mash-up of gene annotations and expression profiles.
Nucleic Acids Res., 2016

Branch: an interactive, web-based tool for testing hypotheses and developing predictive models.
Bioinform., 2016

Centralizing content and distributing labor: a community model for curating the very long tail of microbial genomes.
Database J. Biol. Databases Curation, 2016

A crowdsourcing workflow for extracting chemical-induced disease relations from free text.
Database J. Biol. Databases Curation, 2016

Wikidata as a semantic framework for the Gene Wiki initiative.
Database J. Biol. Databases Curation, 2016

Combining machine learning, crowdsourcing and expert knowledge to detect chemical-induced diseases in text.
Database J. Biol. Databases Curation, 2016

Crowdsourcing in biomedicine: challenges and opportunities.
Briefings Bioinform., 2016

Linking Wikidata to the Rest of the Semantic Web.
Proceedings of the 9th International Conference Semantic Web Applications and Tools for Life Sciences, 2016

Opportunities and Challenges Presented by Wikidata in the Context of Biocuration.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

2015
Exposing ambiguities in a relation-extraction gold standard with crowdsourcing.
CoRR, 2015

Omics Pipe: a community-based framework for reproducible multi-omics data analysis.
Bioinform., 2015

Wikidata: A Platform for Data Integration and Dissemination for the Life Sciences and Beyond.
Proceedings of the 8th Semantic Web Applications and Tools for Life Sciences International Conference, 2015

Session Introduction.
Proceedings of the Biocomputing 2015: Proceedings of the Pacific Symposium, 2015

Microtask Crowdsourcing for Disease Mention Annotation in PubMed Abstracts.
Proceedings of the Biocomputing 2015: Proceedings of the Pacific Symposium, 2015

2014
Microtask crowdsourcing for disease mention annotation in PubMed abstracts.
CoRR, 2014

2013
Ten Simple Rules for Cultivating Open Science and Collaborative R&D.
PLoS Comput. Biol., 2013

BioGPS and MyGene.info: organizing online, gene-centric information.
Nucleic Acids Res., 2013

A task-based approach for Gene Ontology evaluation.
J. Biomed. Semant., 2013

Crowdsourcing for bioinformatics.
Bioinform., 2013

2012
The Gene Wiki in 2011: community intelligence applied to human gene annotation.
Nucleic Acids Res., 2012

Linking genes to diseases with a SNPedia-Gene Wiki mashup.
J. Biomed. Semant., 2012

Building a biomedical semantic network in Wikipedia with Semantic Wiki Links.
Database J. Biol. Databases Curation, 2012

A Task-Based Approach for Large-Scale Evaluation of the Gene Ontology.
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

genegames.org: High-Throughput Access to Biological Knowledge and Reasoning through Online Games.
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

2011
TCLUST: A Fast Method for Clustering Genome-Scale Expression Data.
IEEE ACM Trans. Comput. Biol. Bioinform., 2011

2010
The Gene Wiki: community intelligence applied to human gene annotation.
Nucleic Acids Res., 2010

A novel approach to investigate tissue-specific trinucleotide repeat instability.
BMC Syst. Biol., 2010

2006
Comparative analysis of haplotype association mapping algorithms.
BMC Bioinform., 2006


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