Julio Vera

According to our database, Julio Vera authored at least 24 papers between 2003 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Comparative Analysis of Radiomic Features and Gene Expression Profiles in Histopathology Data using Graph Neural Networks.

Luis Carlos Rivera Monroy, Leonhard Rist, Martin Eberhardt, Christian Ostalecki, Andreas Bauer, Julio Vera, Katharina Breininger, Andreas K. Maier

Proceedings of the Bildverarbeitung für die Medizin 2024, 2024

2023

Employing Graph Representations for Cell-Level Characterization of Melanoma MELC Samples.

Luis Carlos Rivera Monroy, Leonhard Rist, Martin Eberhardt, Christian Ostalecki, Andreas Baur, Julio Vera, Katharina Breininger, Andreas Maier

Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023

2022

Melanoma 2.0. Skin cancer as a paradigm for emerging diagnostic technologies, computational modelling and artificial intelligence.

Julio Vera, Xin Lai, Andreas Baur, Michael Erdmann, Shailendra K. Gupta, Cristiano Guttà, Lucie Heinzerling, Markus V. Heppt, Philipp Maximilian Kazmierczak, Manfred Kunz, Christopher Lischer, Brigitte M. Pützer, Markus Rehm, Christian Ostalecki, Jimmy Retzlaff, Stephan Witt, Olaf Wolkenhauer, Carola Berking

Briefings Bioinform., 2022

Melanoma Segmentation and Classification Employing Imaging and Graph Encodings.

Luis Carlos Rivera Monroy, Martin Eberhardt, Christian Ostalecki, Andreas Baur, Julio Vera, Andreas K. Maier

Proceedings of the IEEE/ACM Conference on Connected Health: Applications, 2022

2020

An integrative network-driven pipeline for systematic identification of lncRNA-associated regulatory network motifs in metastatic melanoma.

Nivedita Singh, Martin Eberhardt, Olaf Wolkenhauer, Julio Vera, Shailendra K. Gupta

BMC Bioinform., 2020

2019

Exosomal lncRNAs and cancer: connecting the missing links.

Hojjat Naderi-Meshkin, Xin Lai, Raheleh Amirkhah, Julio Vera, John E. J. Rasko, Ulf Schmitz

Bioinform., 2019

Community effort endorsing multiscale modelling, multiscale data science and multiscale computing for systems medicine.

Massimiliano Zanin, Ivan Chorbev, Blaz Stres, Egils Stalidzans, Julio Vera, Paolo Tieri, Filippo Castiglione, Derek Groen, Huiru Zheng, Jan Baumbach, Johannes A. Schmid, José Basilio, Peter Klimek, Natasa Debeljak, Damjana Rozman, Harald H. H. W. Schmidt

Briefings Bioinform., 2019

2016

The RNA world in the 21st century - a systems approach to finding non-coding keys to clinical questions.

Ulf Schmitz, Hojjat Naderi-Meshkin, Shailendra K. Gupta, Olaf Wolkenhauer, Julio Vera

Briefings Bioinform., 2016

Personalized cancer immunotherapy using Systems Medicine approaches.

Shailendra K. Gupta, Tanushree Jaitly, Ulf Schmitz, Gerold Schuler, Olaf Wolkenhauer, Julio Vera

Briefings Bioinform., 2016

2015

Supervised Cluster Analysis of miRNA Expression Data Using Rough Hypercuboid Partition Matrix.

Sushmita Paul, Julio Vera

Proceedings of the Pattern Recognition and Machine Intelligence, 2015

2011

A model-based strategy to investigate the role of <i>microRNA</i> regulation in cancer signalling networks.

Svetoslav G. Nikolov, Julio Vera, Ulf Schmitz, Olaf Wolkenhauer

Theory Biosci., 2011

2010

Integration of sensitivity and bifurcation analysis to detect critical processes in a model combining signalling and cell population dynamics.

Svetoslav G. Nikolov, Xin Lai, Ulf W. Liebal, Olaf Wolkenhauer, Julio Vera

Int. J. Syst. Sci., 2010

Optimization of biochemical systems through mathematical programming: Methods and applications.

Julio Vera, Carlos González-Alcón, Alberto Marín-Sanguino, Néstor V. Torres

Comput. Oper. Res., 2010

Non-coding RNA detection methods combined to improve usability, reproducibility and precision.

Peter Raasch, Ulf Schmitz, Nadja Patenge, Julio Vera, Bernd Kreikemeyer, Olaf Wolkenhauer

BMC Bioinform., 2010

2009

Exploration of homodimer receptor: homodimer protein interactions.

Julio Vera, Taesoo Kwon, Ulf Schmitz, Walter Kolch, Olaf Wolkenhauer

Int. J. Bioinform. Res. Appl., 2009

A multi-level model accounting for the effects of JAK2-STAT5 signal modulation in erythropoiesis.

Xin Lai, Svetoslav G. Nikolov, Olaf Wolkenhauer, Julio Vera

Comput. Biol. Chem., 2009

2008

Multi-objective steady state optimization of biochemical reaction networks using a constrained genetic algorithm.

Hannes Link, Julio Vera, Dirk Weuster-Botz, Néstor Torres Darias, Ezequiel Franco-Lara

Comput. Chem. Eng., 2008

Dynamics of receptor and protein transducer homodimerisation.

Julio Vera, Thomas Millat, Walter Kolch, Olaf Wolkenhauer

BMC Syst. Biol., 2008

A systems biology approach to analyse amplification in the JAK2-STAT5 signalling pathway.

Julio Vera, Julie Bachmann, Andrea C. Pfeifer, Verena Becker, Jose A. Hormiga, Néstor Torres Darias, Jens Timmer, Ursula Klingmüller, Olaf Wolkenhauer

BMC Syst. Biol., 2008

Dynamic properties of a delayed protein cross talk model.

Svetoslav G. Nikolov, Julio Vera, Vladimir Kotev, Olaf Wolkenhauer, Valko Petrov

Biosyst., 2008

2007

PLMaddon: a power-law module for the Matlab^TM SBToolbox.

Julio Vera, Cheng Sun, Yvonne Oertel, Olaf Wolkenhauer

Bioinform., 2007

Detection of potential enzyme targets by metabolic modelling and optimization: Application to a simple enzymopathy.

Julio Vera, Raul Curto, Marta Cascante, Néstor V. Torres

Bioinform., 2007

SBML export interface for the systems biology toolbox for MATLAB.

Henning Schmidt, Gunnar Drews, Julio Vera, Olaf Wolkenhauer

Bioinform., 2007

2003

MetMAP: An integrated Matlab TM package for analysis and optimization of metabolic systems.

Julio Vera, Néstor V. Torres

Silico Biol., 2003