Paolo Tieri

According to our database, Paolo Tieri authored at least 25 papers between 2003 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

A computational model of the effects of macronutrients absorption and physical exercise on hormonal regulation and metabolic homeostasis.

Maria Concetta Palumbo, Albert A. de Graaf, Micaela Morettini, Paolo Tieri, Shaji Krishnan, Filippo Castiglione

Comput. Biol. Medicine, September, 2023

NIAPU: network-informed adaptive positive-unlabeled learning for disease gene identification.

Paola Stolfi, Andrea Mastropietro, Giuseppe Pasculli, Paolo Tieri, Davide Vergni

Bioinform., February, 2023

Explainable Drug Repurposing Approach From Biased Random Walks.

Filippo Castiglione, Christine Nardini, Elia Onofri, Marco Pedicini, Paolo Tieri

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

Harnessing computational models to uncover the role of the immune system in tuberculosis treatment.

Enrico Mastrostefano, Alessandro Ravoni, Elia Onofri, Paolo Tieri, Filippo Castiglione

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022

PROCONSUL: PRObabilistic exploration of CONnectivity Significance patterns for disease modULe discovery.

Riccardo De Luca, Marco Carfora, Gonzalo Blanco, Andrea Mastropietro, Manuela Petti, Paolo Tieri

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

DruSiLa: an integrated, in-silico disease similarity-based approach for drug repurposing.

Pratuat Amatya, Paola Stolfi, Flavio Lombardi, Paolo Tieri

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

Adaptive Positive-Unlabelled Learning via Markov Diffusion.

Paola Stolfi, Andrea Mastropietro, Giuseppe Pasculli, Paolo Tieri, Davide Vergni

CoRR, 2021

BiCoN: network-constrained biclustering of patients and omics data.

Olga Lazareva, Stefan Canzar, Kevin Yuan, Jan Baumbach, David B. Blumenthal, Paolo Tieri, Tim Kacprowski, Markus List

Bioinform., 2021

Deep learning in systems medicine.

Haiying Wang, Estelle Pujos-Guillot, Blandine Comte, Joao Luis de Miranda, Vojtech Spiwok, Ivan Chorbev, Filippo Castiglione, Paolo Tieri, Steven Watterson, Roisin McAllister, Tiago De Melo Malaquias, Massimiliano Zanin, Taranjit Singh Rai, Huiru Zheng

Briefings Bioinform., 2021

2020

Potential predictors of type-2 diabetes risk: machine learning, synthetic data and wearable health devices.

Paola Stolfi, Ilaria Valentini, Maria Concetta Palumbo, Paolo Tieri, Andrea Grignolio, Filippo Castiglione

BMC Bioinform., 2020

EpiGEN: an epistasis simulation pipeline.

David B. Blumenthal, Lorenzo Viola, Markus List, Jan Baumbach, Paolo Tieri, Tim Kacprowski

Bioinform., 2020

2019

Network Inference and Reconstruction in Bioinformatics.

Paolo Tieri, Lorenzo Farina, Manuela Petti, Laura Astolfi, Paola Paci, Filippo Castiglione

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

Modeling the Effect of High Calorie Diet on the Interplay between Adipose Tissue, Inflammation, and Diabetes.

Vinca Prana, Paolo Tieri, Maria Concetta Palumbo, Emiliano Mancini, Filippo Castiglione

Comput. Math. Methods Medicine, 2019

Community effort endorsing multiscale modelling, multiscale data science and multiscale computing for systems medicine.

Massimiliano Zanin, Ivan Chorbev, Blaz Stres, Egils Stalidzans, Julio Vera, Paolo Tieri, Filippo Castiglione, Derek Groen, Huiru Zheng, Jan Baumbach, Johannes A. Schmid, José Basilio, Peter Klimek, Natasa Debeljak, Damjana Rozman, Harald H. H. W. Schmidt

Briefings Bioinform., 2019

Critical nodes reveal peculiar features of human essential genes and protein interactome.

Alessandro Celestini, Marco Cianfriglia, Enrico Mastrostefano, Alessandro Palma, Filippo Castiglione, Paolo Tieri

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2018

Personalizing physical exercise in a computational model of fuel homeostasis.

Maria Concetta Palumbo, Micaela Morettini, Paolo Tieri, Fasma Diele, Massimo Sacchetti, Filippo Castiglione

PLoS Comput. Biol., 2018

A mathematical model of murine macrophage infected with Leishmania sp.

Henrique Assis Lopes de Ribeiro, Tatiani Uceli Maioli, Leandro Martins de Freitas, Paolo Tieri, Filippo Castiglione

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A mathematical model of Chagas disease infection predicts inhibition of the immune system.

Leandro Martins de Freitas, Tatiani Uceli Maioli, Henrique Assis Lopes de Ribeiro, Paolo Tieri, Filippo Castiglione

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2016

Statistical ensemble of gene regulatory networks of macrophage differentiation.

Filippo Castiglione, Paolo Tieri, Alessandro Palma, Abdul Salam Jarrah

BMC Bioinform., 2016

Multiscale modelling in immunology: a review.

Antonio Cappuccio, Paolo Tieri, Filippo Castiglione

Briefings Bioinform., 2016

2014

Multi-scale Simulation of T Helper Lymphocyte Differentiation.

Paolo Tieri, Vinca Prana, Teresa Colombo, Daniele Santoni, Filippo Castiglione

Proceedings of the Advances in Bioinformatics and Computational Biology, 2014

2007

Networks from Gene Expression Time Series: Characterization of Correlation Patterns.

Daniel Remondini, Nicola Neretti, Claudio Franceschi, Paolo Tieri, John M. Sedivy, Luciano Milanesi, Gastone C. Castellani

Int. J. Bifurc. Chaos, 2007

2005

Quantifying the relevance of different mediators in the human immune cell network.

Paolo Tieri, Silvana Valensin, Vito Latora, Gastone C. Castellani, Massimo Marchiori, Daniel Remondini, Claudio Franceschi

Bioinform., 2005

A General Learning Rule for Network Modeling of Neuroimmune Interactome.

Daniel Remondini, Paolo Tieri, Silvana Valensin, Ettore Verondini, Claudio Franceschi, F. Bersani, Gastone C. Castellani

Proceedings of the Neural Nets, 16th Italian Workshop on Neural Nets, 2005

2003

Memory and Selectivity in Evolving Scale-Free Immune Networks.

Paolo Tieri, Silvana Valensin, Claudio Franceschi, Carlo Morandi, Gastone C. Castellani

Proceedings of the Artificial Immune Systems, Second International Conference, 2003