Lauren Coombe

According to our database, Lauren Coombe authored at least 10 papers between 2018 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2026

ntStat: k-mer characterization using occurrence statistics in raw sequencing data.

Parham Kazemi, Lauren Coombe, René L. Warren, Inanç Birol

PLoS Comput. Biol., 2026

2025

GoldPolish-target: targeted long-read genome assembly polishing.

Emily Zhang, Lauren Coombe, Johnathan Wong, René L. Warren, Inanç Birol

BMC Bioinform., December, 2025

2022

btllib: A C++ library with Python interface for efficient genomic sequence processing.

Vladimir Nikolic, Parham Kazemi, Lauren Coombe, Johnathan Wong, Amirhossein Afshinfard, Justin Chu, René L. Warren, Inanç Birol

J. Open Source Softw., November, 2022

RResolver: efficient short-read repeat resolution within ABySS.

Vladimir Nikolic, Amirhossein Afshinfard, Justin Chu, Johnathan Wong, Lauren Coombe, Ka Ming Nip, René L. Warren, Inanç Birol

BMC Bioinform., 2022

2021

LongStitch: high-quality genome assembly correction and scaffolding using long reads.

Lauren Coombe, Janet X. Li, Theodora Lo, Johnathan Wong, Vladimir Nikolic, René L. Warren, Inanç Birol

BMC Bioinform., 2021

2020

ntJoin: Fast and lightweight assembly-guided scaffolding using minimizer graphs.

Lauren Coombe, Vladimir Nikolic, Justin Chu, Inanç Birol, René L. Warren

Bioinform., 2020

2019

ntEdit: scalable genome sequence polishing.

René L. Warren, Lauren Coombe, Hamid Mohamadi, Jessica Zhang, Barry Jaquish, Nathalie Isabel, Steven J. M. Jones, Jean Bousquet, Jörg Bohlmann, Inanç Birol

Bioinform., 2019

2018

Tigmint: correcting assembly errors using linked reads from large molecules.

Shaun D. Jackman, Lauren Coombe, Justin Chu, René L. Warren, Benjamin P. Vandervalk, Sarah Yeo, Zhuyi Xue, Hamid Mohamadi, Jörg Bohlmann, Steven J. M. Jones, Inanç Birol

BMC Bioinform., 2018

ARKS: chromosome-scale scaffolding of human genome drafts with linked read kmers.

Lauren Coombe, Jessica Zhang, Benjamin P. Vandervalk, Justin Chu, Shaun D. Jackman, Inanç Birol, René L. Warren

BMC Bioinform., 2018

ARCS: scaffolding genome drafts with linked reads.

Sarah Yeo, Lauren Coombe, René L. Warren, Justin Chu, Inanç Birol

Bioinform., 2018