M. Mallar Chakravarty

According to our database1, M. Mallar Chakravarty authored at least 43 papers between 2003 and 2021.

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Bibliography

2021
Embracing diversity and inclusivity in an academic setting: Insights from the Organization for Human Brain Mapping.
NeuroImage, 2021

Hippocampal subfield volumes across the healthy lifespan and the effects of MR sequence on estimates.
NeuroImage, 2021

2020
Investigating microstructural variation in the human hippocampus using non-negative matrix factorization.
NeuroImage, 2020

Sex-biased trajectories of amygdalo-hippocampal morphology change over human development.
NeuroImage, 2020

2019
White matter injury in term neonates with congenital heart diseases: Topology & comparison with preterm newborns.
NeuroImage, 2019

Animal Functional Magnetic Resonance Imaging: Trends and Path Toward Standardization.
Frontiers Neuroinformatics, 2019

2018
Modeling and prediction of clinical symptom trajectories in Alzheimer's disease using longitudinal data.
PLoS Comput. Biol., 2018

Gray-matter structural variability in the human cerebellum: Lobule-specific differences across sex and hemisphere.
NeuroImage, 2018

Corrigendum to "Hippocampus and amygdala volumes from magnetic resonance images in children: Assessing accuracy of FreeSurfer and FSL against manual segmentation"[NeuroImage 129 (2016) 1-14].
NeuroImage, 2018

Heritability estimates of cortical anatomy: The influence and reliability of different estimation strategies.
NeuroImage, 2018

Evaluating accuracy of striatal, pallidal, and thalamic segmentation methods: Comparing automated approaches to manual delineation.
NeuroImage, 2018

Regional brain volume changes following chronic antipsychotic administration are mediated by the dopamine D2 receptor.
NeuroImage, 2018

Toward defining deep brain stimulation targets in MNI space: A subcortical atlas based on multimodal MRI, histology and structural connectivity.
NeuroImage, 2018

Manual segmentation of the fornix, fimbria, and alveus on high-resolution 3T MRI: Application via fully-automated mapping of the human memory circuit white and grey matter in healthy and pathological aging.
NeuroImage, 2018

Learning to Unlearn: Building Immunity to Dataset Bias in Medical Imaging Studies.
CoRR, 2018

2017
BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods.
PLoS Comput. Biol., 2017

CERES: A new cerebellum lobule segmentation method.
NeuroImage, 2017

2016
Hippocampus and amygdala volumes from magnetic resonance images in children: Assessing accuracy of FreeSurfer and FSL against manual segmentation.
NeuroImage, 2016

Deep brain stimulation of the ventromedial prefrontal cortex causes reorganization of neuronal processes and vasculature.
NeuroImage, 2016

Gene Prioritization for Imaging Genetics Studies Using Gene Ontology and a Stratified False Discovery Rate Approach.
Frontiers Neuroinformatics, 2016

2015
Quantitative comparison of 21 protocols for labeling hippocampal subfields and parahippocampal subregions in in vivo MRI: Towards a harmonized segmentation protocol.
NeuroImage, 2015

Regional cerebellar volumes are related to early musical training and finger tapping performance.
NeuroImage, 2015

Multi-contrast unbiased MRI atlas of a Parkinson's disease population.
Int. J. Comput. Assist. Radiol. Surg., 2015

Improving multi-atlas segmentation accuracy by leveraging local neighborhood information during label-fusion.
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

2014
Estimating volumes of the pituitary gland from T1-weighted magnetic-resonance images: Effects of age, puberty, testosterone, and estradiol.
NeuroImage, 2014

Multi-atlas segmentation of the whole hippocampus and subfields using multiple automatically generated templates.
NeuroImage, 2014

Derivation of high-resolution MRI atlases of the human cerebellum at 3 T and segmentation using multiple automatically generated templates.
NeuroImage, 2014

Pydpiper: a flexible toolkit for constructing novel registration pipelines.
Frontiers Neuroinformatics, 2014

2013
A novel in vivo atlas of human hippocampal subfields using high-resolution 3 T magnetic resonance imaging.
NeuroImage, 2013

Does skull shape mediate the relationship between objective features and subjective impressions about the face?
NeuroImage, 2013

Mapping registration sensitivity in MR mouse brain images.
NeuroImage, 2013

2012
Atlas-Based Segmentation of the Subthalamic Nucleus, Red Nucleus, and Substantia Nigra for Deep Brain Stimulation by Incorporating Multiple MRI Contrasts.
Proceedings of the Information Processing in Computer-Assisted Interventions, 2012

2011
An MRI based average macaque monkey stereotaxic atlas and space (MNI monkey space).
NeuroImage, 2011

2010
Neurite density from magnetic resonance diffusion measurements at ultrahigh field: Comparison with light microscopy and electron microscopy.
NeuroImage, 2010

Blindsight Mediated by an S-Cone-independent Collicular Pathway: An fMRI Study in Hemispherectomized Subjects.
J. Cogn. Neurosci., 2010

2008
Towards a validation of atlas warping techniques.
Medical Image Anal., 2008

The Connectivity of the Human Pulvinar: A Diffusion Tensor Imaging Tractography Study.
Int. J. Biomed. Imaging, 2008

Development of FMRI techniques for planning in functional neurosurgery for Parkinson's disease.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Three-dimensional reconstruction of serial histological mouse brain sections.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

2006
The creation of a brain atlas for image guided neurosurgery using serial histological data.
NeuroImage, 2006

Towards a Multi-modal Atlas for Neurosurgical Planning.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006

2005
Anatomical and Electrophysiological Validation of an Atlas for Neurosurgical Planning.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

2003
The Creation of a Brain Atlas for Image Guided Neurosurgery Using Serial Histological Data.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2003


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