Marco Oliva

According to our database, Marco Oliva authored at least 12 papers between 2018 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Pfp-fm: an accelerated FM-index.

Aaron Hong, Marco Oliva, Dominik Köppl, Hideo Bannai, Christina Boucher, Travis Gagie

Algorithms Mol. Biol., December, 2024

2023

Acceleration of FM-Index Queries Through Prefix-Free Parsing.

Aaron Hong, Marco Oliva, Dominik Köppl, Hideo Bannai, Christina Boucher, Travis Gagie

Proceedings of the 23rd International Workshop on Algorithms in Bioinformatics, 2023

Recursive Prefix-Free Parsing for Building Big BWTs.

Marco Oliva, Travis Gagie, Christina Boucher

Proceedings of the Data Compression Conference, 2023

2022

MONI: A Pangenomic Index for Finding Maximal Exact Matches.

Massimiliano Rossi, Marco Oliva, Ben Langmead, Travis Gagie, Christina Boucher

J. Comput. Biol., 2022

Finding Maximal Exact Matches Using the r-Index.

Massimiliano Rossi, Marco Oliva, Paola Bonizzoni, Ben Langmead, Travis Gagie, Christina Boucher

J. Comput. Biol., 2022

Graph Neural Networks for Relational Inductive Bias in Vision-based Deep Reinforcement Learning of Robot Control.

Marco Oliva, Soubarna Banik, Josip Josifovski, Alois C. Knoll

Proceedings of the International Joint Conference on Neural Networks, 2022

CSTs for Terabyte-Sized Data.

Marco Oliva, Davide Cenzato, Massimiliano Rossi, Zsuzsanna Lipták, Travis Gagie, Christina Boucher

Proceedings of the Data Compression Conference, 2022

An interleaved hardware-accelerated k-mer parser.

Franco Milicchio, Marco Oliva, Mattia Prosperi

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

Efficiently Merging r-indexes.

Marco Oliva, Massimiliano Rossi, Jouni Sirén, Giovanni Manzini, Tamer Kahveci, Travis Gagie, Christina Boucher

Proceedings of the 31st Data Compression Conference, 2021

2020

Portable nanopore analytics: are we there yet?

Marco Oliva, Franco Milicchio, Kaden King, Grace Benson, Christina Boucher, Mattia Prosperi, Inanç Birol

Bioinform., 2020

2019

Unexpected Predictors of Antibiotic Resistance in Housekeeping Genes of Staphylococcus Aureus.

Mattia Prosperi, Taj Azarian, Judith A. Johnson, Marco Salemi, Franco Milicchio, Marco Oliva

Proceedings of the 10th ACM International Conference on Bioinformatics, 2019

2018

Third-generation sequencing data analytics on mobile devices: cache oblivious and out-of-core approaches as a proof-of-concept.

Franco Milicchio, Marco Oliva, Christina Boucher, Mattia Prosperi

Proceedings of the 15th International Conference on Mobile Systems and Pervasive Computing (MobiSPC 2018) / The 13th International Conference on Future Networks and Communications (FNC-2018) / Affiliated Workshops, 2018