Marnix H. Medema
Orcid: 0000-0002-2191-2821
According to our database1,
Marnix H. Medema
authored at least 26 papers
between 2011 and 2023.
Collaborative distances:
Collaborative distances:
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Bibliography
2023
CAGECAT: The CompArative GEne Cluster Analysis Toolbox for rapid search and visualisation of homologous gene clusters.
BMC Bioinform., December, 2023
antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation.
Nucleic Acids Res., July, 2023
iPRESTO: Automated discovery of biosynthetic sub-clusters linked to specific natural product substructures.
PLoS Comput. Biol., February, 2023
MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters.
Nucleic Acids Res., January, 2023
2022
J. Cheminformatics, 2022
2021
The antiSMASH database version 3: increased taxonomic coverage and new query features for modular enzymes.
Nucleic Acids Res., 2021
Nucleic Acids Res., 2021
The gutSMASH web server: automated identification of primary metabolic gene clusters from the gut microbiota.
Nucleic Acids Res., 2021
Computational Applications in Secondary Metabolite Discovery (CAiSMD): an online workshop.
J. Cheminformatics, 2021
2020
ARTS 2.0: feature updates and expansion of the Antibiotic Resistant Target Seeker for comparative genome mining.
Nucleic Acids Res., 2020
Nucleic Acids Res., 2020
Coevolution-based prediction of protein-protein interactions in polyketide biosynthetic assembly lines.
Bioinform., 2020
2019
Nucleic Acids Res., 2019
The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters.
Nucleic Acids Res., 2019
Recent development of antiSMASH and other computational approaches to mine secondary metabolite biosynthetic gene clusters.
Briefings Bioinform., 2019
2017
plantiSMASH: automated identification, annotation and expression analysis of plant biosynthetic gene clusters.
Nucleic Acids Res., 2017
antiSMASH 4.0 - improvements in chemistry prediction and gene cluster boundary identification.
Nucleic Acids Res., 2017
The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters.
Nucleic Acids Res., 2017
SANDPUMA: ensemble predictions of nonribosomal peptide chemistry reveal biosynthetic diversity across Actinobacteria.
Bioinform., 2017
2015
antiSMASH 3.0 - a comprehensive resource for the genome mining of biosynthetic gene clusters.
Nucleic Acids Res., 2015
2014
Pep2Path: Automated Mass Spectrometry-Guided Genome Mining of Peptidic Natural Products.
PLoS Comput. Biol., 2014
A Systematic Computational Analysis of Biosynthetic Gene Cluster Evolution: Lessons for Engineering Biosynthesis.
PLoS Comput. Biol., 2014
2013
antiSMASH 2.0 - a versatile platform for genome mining of secondary metabolite producers.
Nucleic Acids Res., 2013
2011
Nucleic Acids Res., 2011
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences.
Nucleic Acids Res., 2011