Eriko Takano

According to our database, Eriko Takano authored at least 11 papers between 2011 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Synteny plot quality control with SyntenyQC.

Timothy D. J. Kirkwood, Jack A. Connolly, Ee Lui Ang, Huimin Zhao, Eriko Takano, Rainer Breitling

Bioinform., 2025

Cross-Granularity Representations for Biological Sequences: Insights From ESM and BiGCARP.

Hanlin Xiao, Rainer Breitling, Eriko Takano, Mauricio A. Álvarez

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2025

Proscope: Modeling Biosynthetic Diversity Via Probabilistic Structure-Aware Co-Embedding.

Yiting Li, Eriko Takano, Jing Zhang, Ben Draper, Wayne Wei Zhong Yeo, Rainer Breitling

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2025

2020

Unravelling the γ-butyrolactone network in Streptomyces coelicolor by computational ensemble modelling.

Areti Tsigkinopoulou, Eriko Takano, Rainer Breitling

PLoS Comput. Biol., 2020

2018

Selenzyme: enzyme selection tool for pathway design.

Pablo Carbonell, Jerry Wong, Neil Swainston, Eriko Takano, Nicholas J. Turner, Nigel S. Scrutton, Douglas B. Kell, Rainer Breitling, Jean-Loup Faulon

Bioinform., 2018

2017

antiSMASH 4.0 - improvements in chemistry prediction and gene cluster boundary identification.

Kai Blin, Thomas Wolf, Marc G. Chevrette, Xiaowen Lu, Christopher J. Schwalen, Satria A. Kautsar, Hernando G. Suarez Duran, Emmanuel L. C. de los Santos, Hyun Uk Kim, Mariana Nave, Jeroen S. Dickschat, Douglas A. Mitchell, Ekaterina Shelest, Rainer Breitling, Eriko Takano, Sang Yup Lee, Tilmann Weber, Marnix H. Medema

Nucleic Acids Res., 2017

2015

antiSMASH 3.0 - a comprehensive resource for the genome mining of biosynthetic gene clusters.

Tilmann Weber, Kai Blin, Srikanth Duddela, Daniel Krug, Hyun Uk Kim, Robert E. Bruccoleri, Sang Yup Lee, Michael A. Fischbach, Rolf Müller, Wolfgang Wohlleben, Rainer Breitling, Eriko Takano, Marnix H. Medema

Nucleic Acids Res., 2015

2014

Pep2Path: Automated Mass Spectrometry-Guided Genome Mining of Peptidic Natural Products.

Marnix H. Medema, Yared Paalvast, Don D. Nguyen, Alexey Melnik, Pieter C. Dorrestein, Eriko Takano, Rainer Breitling

PLoS Comput. Biol., 2014

A Systematic Computational Analysis of Biosynthetic Gene Cluster Evolution: Lessons for Engineering Biosynthesis.

Marnix H. Medema, Peter Cimermancic, Andrej Sali, Eriko Takano, Michael A. Fischbach

PLoS Comput. Biol., 2014

2013

antiSMASH 2.0 - a versatile platform for genome mining of secondary metabolite producers.

Kai Blin, Marnix H. Medema, Daniyal Kazempour, Michael A. Fischbach, Rainer Breitling, Eriko Takano, Tilmann Weber

Nucleic Acids Res., 2013

2011

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences.

Marnix H. Medema, Kai Blin, Peter Cimermancic, Victor de Jager, Piotr Zakrzewski, Michael A. Fischbach, Tilmann Weber, Eriko Takano, Rainer Breitling

Nucleic Acids Res., 2011