Mayumi Kamada

According to our database, Mayumi Kamada authored at least 14 papers between 2008 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Network-based prediction approach for cancer-specific driver missense mutations using a graph neural network.

Narumi Hatano, Mayumi Kamada, Ryosuke Kojima, Yasushi Okuno

BMC Bioinform., December, 2023

A New Deep State-Space Analysis Framework for Patient Latent State Estimation and Classification from EHR Time Series Data.

Aya Nakamura, Ryosuke Kojima, Yuji Okamoto, Eiichiro Uchino, Yohei Mineharu, Yohei Harada, Mayumi Kamada, Manabu Muto, Motoko Yanagita, Yasushi Okuno

CoRR, 2023

An end-to-end framework for gene expression classification by integrating a background knowledge graph: application to cancer prognosis prediction.

Kazuma Inoue, Ryosuke Kojima, Mayumi Kamada, Yasushi Okuno

CoRR, 2023

2022

GraphIX: Graph-based In silico XAI(explainable artificial intelligence) for drug repositioning from biopharmaceutical network.

Atsuko Takagi, Mayumi Kamada, Eri Hamatani, Ryosuke Kojima, Yasushi Okuno

CoRR, 2022

2019

Toward more accurate prediction of caspase cleavage sites: a comprehensive review of current methods, tools and features.

Yu Bao, Simone Marini, Takeyuki Tamura, Mayumi Kamada, Shingo Maegawa, Hiroshi Hosokawa, Jiangning Song, Tatsuya Akutsu

Briefings Bioinform., 2019

Med2RDF: Semantic Biomedical Knowledge-base and APIs for the Clinical Genome Medicine.

Mayumi Kamada, Toshiaki Katayama, Shuichi Kawashima, Ryosuke Kojima, Masahiko Nakatsui, Yasushi Okuno

Proceedings of the 12th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences, 2019

2018

Improving conditional random field model for prediction of protein-RNA residue-base contacts.

Morihiro Hayashida, Noriyuki Okada, Mayumi Kamada, Hitoshi Koyano

Quant. Biol., 2018

2017

Construction of Knowledge-Base for Clinical Interpretation of Genomic Variants.

Mayumi Kamada, Toshiaki Katayama, Shuichi Kawashima, Ryosuke Kojima, Masahiko Nakatsui, Yasushi Okuno

Proceedings of the 10th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4LS 2017), 2017

2013

Prediction of protein-RNA residue-base contacts using two-dimensional conditional random field with the lasso.

Morihiro Hayashida, Mayumi Kamada, Jiangning Song, Tatsuya Akutsu

BMC Syst. Biol., 2013

2012

Predicting protein-RNA residue-base contacts using two-dimensional conditional random field.

Morihiro Hayashida, Mayumi Kamada, Jiangning Song, Tatsuya Akutsu

Proceedings of the 6th IEEE International Conference on Systems Biology, 2012

2011

Conditional random field approach to prediction of protein-protein interactions using domain information.

Morihiro Hayashida, Mayumi Kamada, Jiangning Song, Tatsuya Akutsu

BMC Syst. Biol., 2011

Prediction using step-wise L1, L2 regularization and feature selection for small data sets with large number of features.

Ozgur Demir-Kavuk, Mayumi Kamada, Tatsuya Akutsu, Ernst-Walter Knapp

BMC Bioinform., 2011

2009

Clustering the Temporal Sequences Feature of 3D Protein Structure.

Mayumi Kamada, Sachi Kimura, Mikito Toda, Masami Takata, Kazuki Joe

Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, 2009

2008

Construction of an Ethanol-Tolerant Yeast Model using the E-cell System.

Mayumi Kamada, Natsu Nakajima, Chisato Ishikawa, Masami Takata, Kazuki Joe

Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, 2008