Michael Snyder

According to our database1, Michael Snyder authored at least 31 papers between 2000 and 2018.

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Bibliography

2018
Omics AnalySIs System for PRecision Oncology (OASISPRO): a web-based omics analysis tool for clinical phenotype prediction.
Bioinformatics, 2018

Unraveling the Molecular Basis of Lung Adenocarcinoma Dedifferentiation and Prognosis by Integrating Omics and Histopathology.
Proceedings of the AMIA 2018, 2018

2017
Cloud-based interactive analytics for terabytes of genomic variants data.
Bioinformatics, 2017

Harnessing Big Data for Precision Medicine: Infrastructures and Applications.
Proceedings of the Biocomputing 2017: Proceedings of the Pacific Symposium, 2017

Consumer Wearable Devices for Health Surveillance and Disease Monitoring.
Proceedings of the Summit on Clinical Research Informatics, 2017

Predicting Non-Small Cell Lung Cancer Diagnosis and Prognosis by Fully Automated Microscopic Pathology Image Features.
Proceedings of the AMIA 2017, 2017

2016
Invited Talks at the AAAI Symposium on Well-Being Computing.
Proceedings of the 2016 AAAI Spring Symposia, 2016

2014
Comparative analysis of regulatory information and circuits across distant species Open.
Nature, 2014

A novel display for situational awareness at a network operations center.
CoRR, 2014

PATH-SCAN: A Reporting Tool for Identifying Clinically Actionable Variants.
Proceedings of the Biocomputing 2014: Proceedings of the Pacific Symposium, 2014

2013
Metadata Checklist for the Integrated Personal Omics Study: Proteomics and Metabolomics Experiments.
Big Data, 2013

Toward More Transparent and Reproducible Omics Studies Through a Common Metadata Checklist and Data Publications.
Big Data, 2013

2012
VAT: a computational framework to functionally annotate variants in personal genomes within a cloud-computing environment.
Bioinformatics, 2012

Interpretome: A Freely Available, Modular, and Secure Personal Genome Interpretation Engine.
Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012

2011
Measuring the Evolutionary Rewiring of Biological Networks.
PLoS Computational Biology, 2011

Construction and Analysis of an Integrated Regulatory Network Derived from High-Throughput Sequencing Data.
PLoS Computational Biology, 2011

RSEQtools: a modular framework to analyze RNA-Seq data using compact, anonymized data summaries.
Bioinformatics, 2011

2010
MOTIPS: Automated Motif Analysis for Predicting Targets of Modular Protein Domains.
BMC Bioinformatics, 2010

2009
Integrating Sequencing Technologies in Personal Genomics: Optimal Low Cost Reconstruction of Structural Variants.
PLoS Computational Biology, 2009

2008
Modeling ChIP Sequencing In Silico with Applications.
PLoS Computational Biology, 2008

2006
A supervised hidden markov model framework for efficiently segmenting tiling array data in transcriptional and chIP-chip experiments: systematically incorporating validated biological knowledge.
Bioinformatics, 2006

2005
Analysis of Genomic Tiling Microarrays for Transcript Mapping and the Identification of Transcription Factor Binding Sites.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2005

2004
Fast Optimal Genome Tiling with Applications to Microarray Design and Homology Search.
Journal of Computational Biology, 2004

2003
ExpressYourself: a modular platform for processing and visualizing microarray data
Nucleic Acids Research, 2003

2002
The TRIPLES database: a community resource for yeast molecular biology.
Nucleic Acids Research, 2002

A dynamic approach to mapping coordinates between microplates and microarrays.
Journal of Biomedical Informatics, 2002


2001
An XML Application For Genomic Data Interoperation.
Proceedings of the 2nd IEEE International Symposium on Bioinformatics and Bioengineering, 2001

A metadata framework for interoperating heterogeneous genome data using XML.
Proceedings of the AMIA 2001, 2001

2000
TRIPLES: a database of gene function in Saccharomyces cerevisiae.
Nucleic Acids Research, 2000

Graphically-enabled integration of bioinformatics tools allowing parallel execution.
Proceedings of the AMIA 2000, 2000


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