Milong Ren

According to our database, Milong Ren authored at least 10 papers between 2023 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

ProtDBench: A Unified Benchmark of Protein Binder Design and Evaluation.

Cong Liu, Milong Ren, Jiaqi Guan, Chengyue Gong, Jinyuan Sun, Xinshi Chen, Wenzhi Xiao

CoRR, May, 2026

A-CODE: Fully Atomic Protein Co-Design with Unified Multimodal Diffusion.

Chaoran Cheng, Jiaqi Guan, Milong Ren, Chengyue Gong, Cong Liu, Xinshi Chen, Ge Liu, Wenzhi Xiao

CoRR, May, 2026

GGFlow: A Graph Flow Matching Method with Efficient Optimal Transport.

Xiaoyang Hou, Tian Zhu, Milong Ren, Dongbo Bu, Xin Gao, Chunming Zhang, Shiwei Sun

Trans. Mach. Learn. Res., 2026

2025

Multi-objective antibody design with constrained preference optimization.

Milong Ren, ZaiKai He, Haicang Zhang

Proceedings of the Thirteenth International Conference on Learning Representations, 2025

2024

NIERT: Accurate Numerical Interpolation Through Unifying Scattered Data Representations Using Transformer Encoder.

Shizhe Ding, Boyang Xia, Milong Ren, Dongbo Bu

IEEE Trans. Knowl. Data Eng., November, 2024

Accurate and robust protein sequence design with CarbonDesign.

Milong Ren, Chungong Yu, Dongbo Bu, Haicang Zhang

Nat. Mac. Intell., 2024

Improving Molecular Graph Generation with Flow Matching and Optimal Transport.

Xiaoyang Hou, Tian Zhu, Milong Ren, Dongbo Bu, Xin Gao, Chunming Zhang, Shiwei Sun

CoRR, 2024

Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical and Geometric Constraints.

Tian Zhu, Milong Ren, Haicang Zhang

Proceedings of the Forty-first International Conference on Machine Learning, 2024

CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model.

Milong Ren, Tian Zhu, Haicang Zhang

Proceedings of the Forty-first International Conference on Machine Learning, 2024

2023

Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model.

Shiwei Liu, Tian Zhu, Milong Ren, Chungong Yu, Dongbo Bu, Haicang Zhang

Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023