Naima Ahmed Fahmi

According to our database, Naima Ahmed Fahmi authored at least 6 papers between 2020 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

EpGAT: integrating epigenetics and 3D genome structure to predict alternative splicing and polyadenylation.

Sudipto Baul, Naima Ahmed Fahmi, Guangyu Wang, Hao Zheng, Ahmed Louri, Jeongsik Yong, Wei Zhang

Briefings Bioinform., 2026

2025

IPScan: Detecting novel intronic PolyAdenylation events with RNA-seq data.

Naima Ahmed Fahmi, Sze Cheng, Jeovani Overstreet, Qianqian Song, Jeongsik Yong, Wei Zhang

PLoS Comput. Biol., 2025

2022

APA-Scan: detection and visualization of 3′-UTR alternative polyadenylation with RNA-seq and 3′-end-seq data.

Naima Ahmed Fahmi, Khandakar Tanvir Ahmed, Jae-Woong Chang, Heba Nassereddeen, Deliang Fan, Jeongsik Yong, Wei Zhang

BMC Bioinform., 2022

2021

PIM-Quantifier: A Processing-in-Memory Platform for mRNA Quantification.

Fan Zhang, Shaahin Angizi, Naima Ahmed Fahmi, Wei Zhang, Deliang Fan

Proceedings of the 58th ACM/IEEE Design Automation Conference, 2021

2020

PANDA: Processing-in-MRAM Accelerated De Bruijn Graph based DNA Assembly.

Shaahin Angizi, Naima Ahmed Fahmi, Wei Zhang, Deliang Fan

CoRR, 2020

PIM-Assembler: A Processing-in-Memory Platform for Genome Assembly.

Shaahin Angizi, Naima Ahmed Fahmi, Wei Zhang, Deliang Fan

Proceedings of the 57th ACM/IEEE Design Automation Conference, 2020