Nicola Neretti

According to our database, Nicola Neretti authored at least 14 papers between 2002 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2022

TADBay: A Bayesian Construction of Topologically Associated Domains.

Carlos Soto, Darshan W. Bryner, Audrey Dalgarno, Nicola Neretti, Anuj Srivastava

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

Toward a Three-Dimensional Chromosome Shape Alphabet.

Carlos Soto, Darshan W. Bryner, Nicola Neretti, Anuj Srivastava

J. Comput. Biol., 2021

Representation of Chromosome Conformations Using a Shape Alphabet Across Modeling Methods.

Carlos Soto, Audrey Dalgarno, Darshan W. Bryner, Benjamin McLaughlin, Nicola Neretti, Anuj Srivastava

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2019

Bayesian Estimation of Three-Dimensional Chromosomal Structure from Single-Cell Hi-C Data.

Michael Rosenthal, Darshan W. Bryner, Fred W. Huffer, Shane Evans, Anuj Srivastava, Nicola Neretti

J. Comput. Biol., 2019

2017

GINOM: A statistical framework for assessing interval overlap of multiple genomic features.

Darshan W. Bryner, Stephen Criscione, Andrew Leith, Quyen Huynh, Fred W. Huffer, Nicola Neretti

PLoS Comput. Biol., 2017

2013

CORaL: Comparison of Ranked Lists for Analysis of Gene Expression Data.

Michael Antosh, David Fox, Leon N. Cooper, Nicola Neretti

J. Comput. Biol., 2013

2008

MAP fusion method for superresolution of images with locally varying pixel quality.

Kio Kim, Nicola Neretti, Nathan Intrator

Int. J. Imaging Syst. Technol., 2008

Reconstructing networks of pathways via significance analysis of their intersections.

Mirko Francesconi, Daniel Remondini, Nicola Neretti, John M. Sedivy, Leon N. Cooper, Ettore Verondini, Luciano Milanesi, Gastone C. Castellani

BMC Bioinform., 2008

2007

Networks from Gene Expression Time Series: Characterization of Correlation Patterns.

Daniel Remondini, Nicola Neretti, Claudio Franceschi, Paolo Tieri, John M. Sedivy, Luciano Milanesi, Gastone C. Castellani

Int. J. Bifurc. Chaos, 2007

Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation.

Nicola Neretti, Daniel Remondini, Marc Tatar, John M. Sedivy, Michela Pierini, Dawn Mazzatti, Jonathan Powell, Claudio Franceschi, Gastone C. Castellani

BMC Bioinform., 2007

2006

Video Enhancement for Underwater Exploration Using Forward Looking Sonar.

Kio Kim, Nicola Neretti, Nathan Intrator

Proceedings of the Advanced Concepts for Intelligent Vision Systems, 2006

2004

Adaptive pulse optimization for improved sonar range accuracy.

Nicola Neretti, Nathan Intrator, Leon N. Cooper

IEEE Signal Process. Lett., 2004

Image registration and mosaicing of noisy acoustic camera images.

Kio Kim, Nathan Intrator, Nicola Neretti

Proceedings of the 2004 11th IEEE International Conference on Electronics, 2004

2002

An adaptive approach to wavelet filters design.

Nicola Neretti, Nathan Intrator

Proceedings of the 12th IEEE Workshop on Neural Networks for Signal Processing, 2002