Nikolaj Zimic

According to our database, Nikolaj Zimic authored at least 25 papers between 1995 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

Integration of omics data to generate and analyse COVID-19 specific genome-scale metabolic models.

Tadeja Rezen, Alexandre Martins, Miha Mraz, Nikolaj Zimic, Damjana Rozman, Miha Moskon

Comput. Biol. Medicine, 2022

A computational design of a programmable biological processor.

Miha Moskon, Ziga Pusnik, Lidija Stanovnik, Nikolaj Zimic, Miha Mraz

Biosyst., 2022

2021

Distributed biological computation: from oscillators, logic gates and switches to a multicellular processor and neural computing applications.

Miha Moskon, Roman Komac, Nikolaj Zimic, Miha Mraz

Neural Comput. Appl., 2021

Field-programmable biological circuits and configurable (bio)logic blocks for distributed biological computing.

Miha Moskon, Ziga Pusnik, Nikolaj Zimic, Miha Mraz

Comput. Biol. Medicine, 2021

2018

Grohar: Automated Visualization of Genome-Scale Metabolic Models and Their Pathways.

Miha Moskon, Nikolaj Zimic, Miha Mraz

J. Comput. Biol., 2018

Semi-quantitative Modelling of Gene Regulatory Processes with Unknown Parameter Values Using Fuzzy Logic and Petri Nets.

Jure Bordon, Miha Moskon, Nikolaj Zimic, Miha Mraz

Fundam. Informaticae, 2018

2017

Classical Mechanics Approach Applied to Analysis of Genetic Oscillators.

Anastasiia Vasylchenkova, Miha Mraz, Nikolaj Zimic, Miha Moskon

IEEE ACM Trans. Comput. Biol. Bioinform., 2017

Computational design of synchronous sequential structures in biological systems.

Lidija Magdevska, Ziga Pusnik, Miha Mraz, Nikolaj Zimic, Miha Moskon

J. Comput. Sci., 2017

Computational modelling of genome-scale metabolic networks and its application to CHO cell cultures.

Ziva Rejc, Lidija Magdevska, Tilen Trselic, Timotej Osolin, Rok Vodopivec, Jakob Mraz, Eva Pavliha, Nikolaj Zimic, Tanja Cvitanovic, Damjana Rozman, Miha Moskon, Miha Mraz

Comput. Biol. Medicine, 2017

2016

Computational Framework for Modeling Multiple Noncooperative Transcription Factor Binding and Its Application to the Analysis of Nuclear Factor Kappa B Oscillatory Response.

Manca Bizjak, Nikolaj Zimic, Miha Mraz, Miha Moskon

J. Comput. Biol., 2016

2015

Hardware Implementation of FAST Algorithm for Mobile Applications.

Domen Soberl, Nikolaj Zimic, Ales Leonardis, Jaka Krivic, Miha Moskon

J. Signal Process. Syst., 2015

Fuzzy Logic as a Computational Tool for Quantitative Modelling of Biological Systems with Uncertain Kinetic Data.

Jure Bordon, Miha Moskon, Nikolaj Zimic, Miha Mraz

IEEE ACM Trans. Comput. Biol. Bioinform., 2015

Stochastic Simulation Algorithm for Gene Regulatory Networks with Multiple Binding Sites.

Mattia Petroni, Nikolaj Zimic, Miha Mraz, Miha Moskon

J. Comput. Biol., 2015

2014

An adaptive genetic algorithm for parameter estimation of biological oscillator models to achieve target quantitative system response.

Martin Strazar, Miha Mraz, Nikolaj Zimic, Miha Moskon

Nat. Comput., 2014

2009

The Ternary Quantum-dot Cellular Automata Memorizing Cell.

Primoz Pecar, Miha Janez, Nikolaj Zimic, Miha Mraz, Iztok Lebar Bajec

Proceedings of the IEEE Computer Society Annual Symposium on VLSI, 2009

2008

Towards Multistate Nanocomputing: The Implementation of a Primitive Fuzzy Controller.

Miha Mraz, Zlatko Magdevski, Jelena Ficzko, Nikolaj Zimic, Miha Moskon, Miha Janez, Iztok Lebar Bajec

Proceedings of the Second International Conference on Quantum, 2008

2006

Decomposition of a complex fuzzy controller for the truck-and-trailer reverse parking problem.

Nikolaj Zimic, Miha Mraz

Math. Comput. Model., 2006

2004

Fuzzy logic used for modelling and simulation of massive processes: A useful tool for nanotechnologies?

Miha Mraz, Iztok Lebar Bajec, Nikolaj Zimic

Proceedings of the IASTED International Conference on Neural Networks and Computational Intelligence, 2004

2003

Virtual coronary cineangiography.

Iztok Lebar Bajec, Primoz Trunk, D. Oseli, Nikolaj Zimic

Comput. Biol. Medicine, 2003

Fuzzifying the Thoughts of Animats.

Iztok Lebar Bajec, Nikolaj Zimic, Miha Mraz

Proceedings of the Fuzzy Sets and Systems - IFSA 2003, 10th International Fuzzy Systems Association World Congress, Istanbul, Turkey, June 30, 2003

2000

Fuzzy cellular automata: from theory to applications.

Miha Mraz, Nikolaj Zimic, Iztok Lapanja, Iztok Lebar Bajec

Proceedings of the 12th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2000), 2000

1999

Intelligent bush fire spread prediction using fuzzy cellular automata.

Miha Mraz, Nikolaj Zimic, Jernej Virant

J. Intell. Fuzzy Syst., 1999

T-type fuzzy memory cells.

Jernej Virant, Nikolaj Zimic, Miha Mraz

Fuzzy Sets Syst., 1999

1996

Attention to time in fuzzy logic.

Jernej Virant, Nikolaj Zimic

Fuzzy Sets Syst., 1996

1995

Fuzzy automata with fuzzy relief.

Jernej Virant, Nikolaj Zimic

IEEE Trans. Fuzzy Syst., 1995