Ondrej Schindler

According to our database, Ondrej Schindler authored at least 7 papers between 2020 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2026

Analysis of cyclohexane, cyclopentane, and benzene conformations in ligands for PDB X-ray structures using the Hill-Reilly approach.

Gabriela Buceková, Viktoriia Doshchenko, Tomás Svoboda, Jana Porubská, Aliaksei Chareshneu, Tomás Racek, Vladimír Horský, Radka Svobodová Vareková, Ondrej Schindler

J. Cheminformatics, December, 2026

2025

Gromacs MetaDump: a tool for extracting GROMACS simulation metadata.

Adrián Rosinec, Terézia Slanináková, Tomás Pavlík, Róbert Randiak, Tomás Svoboda, Tomás Racek, Gabriela Buceková, Ondrej Schindler, Matej Antol, Ales Krenek, Karel Berka, Radka Svobodová Vareková

J. Cheminformatics, December, 2025

MOLEonline: a web-based tool for analysing channels, tunnels, and pores (2025 update).

Tomás Racek, Dusan Vel'ký, Gabriela Buceková, Ondrej Schindler, Ivana Hutarová Vareková, Anna Spacková, Václav Bazgier, Karel Berka, Radka Svobodová Vareková

Bioinform., 2025

2023

αCharges: partial atomic charges for AlphaFold structures in high quality.

Ondrej Schindler, Karel Berka, Alessio Cantara, Ales Krenek, Dominik Tichý, Tomás Racek, Radka Svobodová Vareková

Nucleic Acids Res., July, 2023

2021

Correction to: Optimized SQE atomic charges for peptides accessible via a web application.

Ondrej Schindler, Tomás Racek, Aleksandra Marsavelski, Jaroslav Koca, Karel Berka, Radka Svobodová Vareková

J. Cheminformatics, 2021

Optimized SQE atomic charges for peptides accessible via a web application.

Ondrej Schindler, Tomás Racek, Aleksandra Marsavelski, Jaroslav Koca, Karel Berka, Radka Svobodová Vareková

J. Cheminformatics, 2021

2020

Atomic Charge Calculator II: web-based tool for the calculation of partial atomic charges.

Tomás Racek, Ondrej Schindler, Dominik Tousek, Vladimír Horský, Karel Berka, Jaroslav Koca, Radka Svobodová Vareková

Nucleic Acids Res., 2020