Paul A. Bates

According to our database, Paul A. Bates authored at least 20 papers between 2002 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

Matrix feedback enables diverse higher-order patterning of the extracellular matrix.

Esther Wershof, Danielle Park, Robert P. Jenkins, David J. Barry, Erik Sahai, Paul A. Bates

PLoS Comput. Biol., 2019

Development of a Deep Learning Method to Predict Optimal Ablation Patterns for Atrial Fibrillation.

Marica Muffoletto, Xiao Fu, Aditi Roy, Marta Varela, Paul A. Bates, Oleg V. Aslanidi

Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2019

2017

IRaPPA: information retrieval based integration of biophysical models for protein assembly selection.

Iain H. Moal, Didier Barradas-Bautista, Brian Jiménez-García, Mieczyslaw Torchala, Arjan van der Velde, Thom Vreven, Zhiping Weng, Paul A. Bates, Juan Fernández-Recio

Bioinform., 2017

2016

Optimisation of a Molecular Dynamics Simulation of Chromosome Condensation.

Timothy R. Law, Jonny Hancox, Tammy M. K. Cheng, Raphael A. G. Chaleil, Steven A. Wright, Paul A. Bates, Stephen A. Jarvis

Proceedings of the 28th International Symposium on Computer Architecture and High Performance Computing, 2016

2013

Characterizing Changes in the Rate of Protein-Protein Dissociation upon Interface Mutation Using Hotspot Energy and Organization.

Rudi Agius, Mieczyslaw Torchala, Iain H. Moal, Juan Fernández-Recio, Paul A. Bates

PLoS Comput. Biol., 2013

RaTrav: a tool for calculating mean first-passage times on biochemical networks.

Mieczyslaw Torchala, Przemyslaw Chelminiak, Michal Kurzynski, Paul A. Bates

BMC Syst. Biol., 2013

The scoring of poses in protein-protein docking: current capabilities and future directions.

Iain H. Moal, Mieczyslaw Torchala, Paul A. Bates, Juan Fernández-Recio

BMC Bioinform., 2013

SwarmDock: a server for flexible protein-protein docking.

Mieczyslaw Torchala, Iain H. Moal, Raphael A. G. Chaleil, Juan Fernández-Recio, Paul A. Bates

Bioinform., 2013

2012

Kinetic Rate Constant Prediction Supports the Conformational Selection Mechanism of Protein Binding.

Iain H. Moal, Paul A. Bates

PLoS Comput. Biol., 2012

A Structural Systems Biology Approach for Quantifying the Systemic Consequences of Missense Mutations in Proteins.

Tammy M. K. Cheng, Lucas Goehring, Linda Jeffery, Yu-En Lu, Jacqueline Hayles, Béla Novák, Paul A. Bates

PLoS Comput. Biol., 2012

2011

Protein-protein binding affinity prediction on a diverse set of structures.

Iain H. Moal, Rudi Agius, Paul A. Bates

Bioinform., 2011

2010

Bridging the gaps: atomic simulation of macromolecular environment brings together protein docking, interaction kinetics and the crowding effects.

Xiaofan F. Li, Iain H. Moal, Paul A. Bates

BMC Bioinform., 2010

2009

Tipping the Balance: Robustness of Tip Cell Selection, Migration and Fusion in Angiogenesis.

Katie Bentley, Giovanni Mariggi, Holger Gerhardt, Paul A. Bates

PLoS Comput. Biol., 2009

2008

Artificial life as cancer research - embodied agent modelling of blood vessel growth in tumours.

Katie Bentley, Paul A. Bates, Holger Gerhardt

Proceedings of the Eleventh International Conference on the Synthesis and Simulation of Living Systems, 2008

2006

Can MM-PBSA calculations predict the specificities of protein kinase inhibitors?

Christopher S. Page, Paul A. Bates

J. Comput. Chem., 2006

Cluster analysis of networks generated through homology: automatic identification of important protein communities involved in cancer metastasis.

Pall F. Jonsson, Tamara Cavanna, Daniel Zicha, Paul A. Bates

BMC Bioinform., 2006

Developing a move-set for protein model refinement.

Marc N. Offman, Paul W. Fitzjohn, Paul A. Bates

Bioinform., 2006

Global topological features of cancer proteins in the human interactome.

Pall F. Jonsson, Paul A. Bates

Bioinform., 2006

Probability-based model of protein-protein interactions on biological timescales.

Alexander L. Tournier, Paul W. Fitzjohn, Paul A. Bates

Algorithms Mol. Biol., 2006

2002

Domain Fishing: a first step in protein comparative modelling.

Bruno Contreras-Moreira, Paul A. Bates

Bioinform., 2002