Qianmu Yuan

According to our database, Qianmu Yuan authored at least 13 papers between 2021 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

GeoPMB: An Interface-Aware Geometric Deep Learning Framework for Peptide-MHCI Binding Prediction with Evolutionary Insight.

Xiaoyu Chen, Leyu Chen, Mingming Zhu, Qianmu Yuan, Yuedong Yang

J. Chem. Inf. Model., 2026

Advancing Protein Design via Multi-Agent Reinforcement Learning with Pareto-Based Collaborative Optimization.

Mingming Zhu, Jiahua Rao, Xiaoyu Chen, Qianmu Yuan, Yuedong Yang

Proceedings of the Fortieth AAAI Conference on Artificial Intelligence, 2026

2025

A 3D pocket-aware and evolutionary conserved interaction guided diffusion model for molecular optimization.

Anjie Qiao, Hao Zhang, Qianmu Yuan, Qirui Deng, Jingtian Su, Weifeng Huang, Huihao Zhou, Guo-Bo Li, Zhen Wang, Jinping Lei

CoRR, May, 2025

2024

Predicting the effects of mutations on protein solubility using graph convolution network and protein language model representation.

Jing Wang, Sheng Chen, Qianmu Yuan, Jianwen Chen, Danping Li, Lei Wang, Yuedong Yang

J. Comput. Chem., March, 2024

GP-nano: a geometric graph network for nanobody polyreactivity prediction.

Xiaolong Zhou, Qianmu Yuan, Shuangjia Zheng, Yu Wang, Yuedong Yang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

2023

DeepProSite: structure-aware protein binding site prediction using ESMFold and pretrained language model.

Yitian Fang, Yi Jiang, Leyi Wei, Qin Ma, Zhixiang Ren, Qianmu Yuan, Dong-Qing Wei

Bioinform., December, 2023

Accurately identifying nucleic-acid-binding sites through geometric graph learning on language model predicted structures.

Yidong Song, Qianmu Yuan, Huiying Zhao, Yuedong Yang

Briefings Bioinform., September, 2023

Fast and accurate protein intrinsic disorder prediction by using a pretrained language model.

Yidong Song, Qianmu Yuan, Sheng Chen, Ken Chen, Yaoqi Zhou, Yuedong Yang

Briefings Bioinform., July, 2023

Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion.

Qianmu Yuan, Junjie Xie, Jiancong Xie, Huiying Zhao, Yuedong Yang

Briefings Bioinform., May, 2023

Identifying B-cell epitopes using AlphaFold2 predicted structures and pretrained language model.

Yuansong Zeng, Zhuoyi Wei, Qianmu Yuan, Sheng Chen, Weijiang Yu, Yutong Lu, Jianzhao Gao, Yuedong Yang

Bioinform., April, 2023

2022

Alignment-free metal ion-binding site prediction from protein sequence through pretrained language model and multi-task learning.

Qianmu Yuan, Sheng Chen, Yu Wang, Huiying Zhao, Yuedong Yang

Briefings Bioinform., 2022

AlphaFold2-aware protein-DNA binding site prediction using graph transformer.

Qianmu Yuan, Sheng Chen, Jiahua Rao, Shuangjia Zheng, Huiying Zhao, Yuedong Yang

Briefings Bioinform., 2022

2021

Structure-aware protein-protein interaction site prediction using deep graph convolutional network.

Qianmu Yuan, Jianwen Chen, Huiying Zhao, Yaoqi Zhou, Yuedong Yang

Bioinform., 2021