Yutong Lu

According to our database, Yutong Lu authored at least 179 papers between 2005 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Exploring Low-Resource Medical Image Classification with Weakly Supervised Prompt Learning.

Fudan Zheng, Jindong Cao, Weijiang Yu, Zhiguang Chen, Nong Xiao, Yutong Lu

CoRR, 2024

Intensive Vision-guided Network for Radiology Report Generation.

Fudan Zheng, Mengfei Li, Ying Wang, Weijiang Yu, Ruixuan Wang, Zhiguang Chen, Nong Xiao, Yutong Lu

CoRR, 2024

Extreme-scale Direct Numerical Simulation of Incompressible Turbulence on the Heterogeneous Many-core System.

Jiabin Xie, Guangnan Feng, Han Huang, Junxuan Feng, Zhiguang Chen, Yutong Lu

Proceedings of the 29th ACM SIGPLAN Annual Symposium on Principles and Practice of Parallel Programming, 2024

Liger: Interleaving Intra- and Inter-Operator Parallelism for Distributed Large Model Inference.

Jiangsu Du, Jinhui Wei, Jiazhi Jiang, Shenggan Cheng, Dan Huang, Zhiguang Chen, Yutong Lu

Proceedings of the 29th ACM SIGPLAN Annual Symposium on Principles and Practice of Parallel Programming, 2024

2023

Improving Computation and Memory Efficiency for Real-world Transformer Inference on GPUs.

Jiangsu Du, Jiazhi Jiang, Jiang Zheng, Hongbin Zhang, Dan Huang, Yutong Lu

ACM Trans. Archit. Code Optim., December, 2023

Securing the Ethereum from Smart Ponzi Schemes: Identification Using Static Features.

Zibin Zheng, Weili Chen, Zhijie Zhong, Zhiguang Chen, Yutong Lu

ACM Trans. Softw. Eng. Methodol., September, 2023

Hierarchical Model Parallelism for Optimizing Inference on Many-core Processor via Decoupled 3D-CNN Structure.

Jiazhi Jiang, Zijiang Huang, Dan Huang, Jiangsu Du, Lin Chen, Ziguan Chen, Yutong Lu

ACM Trans. Archit. Code Optim., September, 2023

Optimizing massively parallel sparse matrix computing on ARM many-core processor.

Jiang Zheng, Jiazhi Jiang, Jiangsu Du, Dan Huang, Yutong Lu

Parallel Comput., September, 2023

PSLT: A Light-Weight Vision Transformer With Ladder Self-Attention and Progressive Shift.

Gaojie Wu, Wei-Shi Zheng, Yutong Lu, Qi Tian

IEEE Trans. Pattern Anal. Mach. Intell., September, 2023

ShockSurv: A machine learning model to accurately predict 28-day mortality for septic shock patients in the intensive care unit.

Fudan Zheng, Luhao Wang, Yuxian Pang, Zhiguang Chen, Yutong Lu, Yuedong Yang, Jianfeng Wu

Biomed. Signal Process. Control., September, 2023

Full-Stack Optimizing Transformer Inference on ARM Many-Core CPU.

Jiazhi Jiang, Jiangsu Du, Dan Huang, Zhiguang Chen, Yutong Lu, Xiangke Liao

IEEE Trans. Parallel Distributed Syst., July, 2023

A Transformer-Based Framework for Parameter Learning of a Land Surface Hydrological Process Model.

Klin Li, Yutong Lu

Remote. Sens., July, 2023

A parallel structured banded DC algorithm for symmetric eigenvalue problems.

Shengguo Li, Xia Liao, Yutong Lu, José E. Román, Xiaoqiang Yue

CCF Trans. High Perform. Comput., June, 2023

Identifying B-cell epitopes using AlphaFold2 predicted structures and pretrained language model.

Yuansong Zeng, Zhuoyi Wei, Qianmu Yuan, Sheng Chen, Weijiang Yu, Yutong Lu, Jianzhao Gao, Yuedong Yang

Bioinform., April, 2023

Identifying spatial domain by adapting transcriptomics with histology through contrastive learning.

Yuansong Zeng, Rui Yin, Mai Luo, Jianing Chen, Zixiang Pan, Yutong Lu, Weijiang Yu, Yuedong Yang

Briefings Bioinform., March, 2023

VSTH: a user-friendly web server for structure-based virtual screening on Tianhe-2.

Qing Mo, Zexin Xu, Hui Yan, Pin Chen, Yutong Lu

Bioinform., January, 2023

Hybrid MPI and CUDA paralleled finite volume unstructured CFD simulations on a multi-GPU system.

Xi Zhang, Xiaohu Guo, Yue Weng, Xianwei Zhang, Yutong Lu, Zhong Zhao

Future Gener. Comput. Syst., 2023

Sparkles: Unlocking Chats Across Multiple Images for Multimodal Instruction-Following Models.

Yupan Huang, Zaiqiao Meng, Fangyu Liu, Yixuan Su, Nigel Collier, Yutong Lu

CoRR, 2023

Form 10-K Itemization.

Yanci Zhang, Mengjia Xia, Mingyang Li, Haitao Mao, Yutong Lu, Yupeng Lan, Jinlin Ye, Rui Dai

CoRR, 2023

Crystal Structure Prediction by Joint Equivariant Diffusion.

Rui Jiao, Wenbing Huang, Peijia Lin, Jiaqi Han, Pin Chen, Yutong Lu, Yang Liu

Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

LocLoc: Low-level Cues and Local-area Guides for Weakly Supervised Object Localization.

Xinzi Cao, Xiawu Zheng, Yunhang Shen, Ke Li, Jie Chen, Yutong Lu, Yonghong Tian

Proceedings of the 31st ACM International Conference on Multimedia, 2023

GRAP: Group-level Resource Allocation Policy for Reconfigurable Dragonfly Network in HPC.

Guangnan Feng, Dezun Dong, Shizhen Zhao, Yutong Lu

Proceedings of the 37th International Conference on Supercomputing, 2023

KeSCo: Compiler-based Kernel Scheduling for Multi-task GPU Applications.

Zejia Lin, Zewei Mo, Xuanteng Huang, Xianwei Zhang, Yutong Lu

Proceedings of the 41st IEEE International Conference on Computer Design, 2023

MixRec: Orchestrating Concurrent Recommendation Model Training on CPU-GPU platform.

Jiazhi Jiang, Rui Tian, Jiangsu Du, Dan Huang, Yutong Lu

Proceedings of the 41st IEEE International Conference on Computer Design, 2023

PEPC: Parallel and Extensible PC Implementation for Causal Structure Learning.

Yongquan Feng, Liyang Xu, Wanrong Huang, Wenjing Yang, Yutong Lu

Proceedings of the 7th International Conference on High Performance Compilation, 2023

Accelerating Inference of 3D-CNN on ARMMany-core CPU via Hierarchical Model Partition.

Jiazhi Jiang, Zijiang Huang, Dan Huang, Jiangsu Du, Yutong Lu

Proceedings of the Design, Automation & Test in Europe Conference & Exhibition, 2023

Accurately Identifying Muscle-Invasive Bladder Cancer from MRI via Weakly Supervised Learning.

Fudan Zheng, Yuedong Yang, Tianxin Lin, Shaoxu Wu, Yong Li, Yutong Lu, Ying Song, Zhiguang Chen, Huiying Zhao

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

FinD: Fine-grained Dynamic Task Scheduling with Lightweight Threads on Many-core Processors.

Nan Hu, Chenglu Yan, Zhiguang Chen, Yutong Lu

Proceedings of the IEEE Intl Conf on Parallel & Distributed Processing with Applications, 2023

Enhancing Multi-physics Coupling on ARM Many-Core Cluster.

Wencheng Shi, Nan Hu, Jiangsu Du, Dan Huang, Yutong Lu

Proceedings of the Advanced Parallel Processing Technologies, 2023

2022

Design and Simulation of Content-Aware Hybrid DRAM-PCM Memory System.

Yinjin Fu, Yutong Lu, Zhiguang Chen, Yang Wu, Nong Xiao

IEEE Trans. Parallel Distributed Syst., 2022

Optimizing data query performance of Bi-cluster for large-scale scientific data in supercomputers.

Xia Liao, Yixian Shen, Shengguo Li, Yutong Lu, Yufei Du, Zhiguang Chen

J. Supercomput., 2022

To Improve Prediction of Binding Residues With DNA, RNA, Carbohydrate, and Peptide Via Multi-Task Deep Neural Networks.

Zhe Sun, Shuangjia Zheng, Huiying Zhao, Zhangming Niu, Yutong Lu, Yi Pan, Yuedong Yang

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

Optimizing small channel 3D convolution on GPU with tensor core.

Jiazhi Jiang, Dan Huang, Jiangsu Du, Yutong Lu, Xiangke Liao

Parallel Comput., 2022

Quantitative evaluation of explainable graph neural networks for molecular property prediction.

Jiahua Rao, Shuangjia Zheng, Yutong Lu, Yuedong Yang

Patterns, 2022

iProX in 2021: connecting proteomics data sharing with big data.

Tao Chen, Jie Ma, Yi Liu, Zhiguang Chen, Nong Xiao, Yutong Lu, Yinjin Fu, Chunyuan Yang, Mansheng Li, Songfeng Wu, Xue Wang, Dongsheng Li, Fuchu He, Henning Hermjakob, Yunping Zhu

Nucleic Acids Res., 2022

Interpretable Graph Transformer Network for Predicting Adsorption Isotherms of Metal-Organic Frameworks.

Pin Chen, Rui Jiao, Jinyu Liu, Yang Liu, Yutong Lu

J. Chem. Inf. Model., 2022

Enhancing Distributed In-Situ CNN Inference in the Internet of Things.

Jiangsu Du, Yunfei Du, Dan Huang, Yutong Lu, Xiangke Liao

IEEE Internet Things J., 2022

SAIH: A Scalable Evaluation Methodology for Understanding AI Performance Trend on HPC Systems.

Jiangsu Du, Dongsheng Li, Yingpeng Wen, Jiazhi Jiang, Dan Huang, Xiangke Liao, Yutong Lu

CoRR, 2022

EnergonAI: An Inference System for 10-100 Billion Parameter Transformer Models.

Jiangsu Du, Ziming Liu, Jiarui Fang, Shenggui Li, Yongbin Li, Yutong Lu, Yang You

CoRR, 2022

A tail-tolerant cloud storage scheduling based on precise periodicity detection.

Yuxiao Han, Jia Ma, Fei Li, Yubo Liu, Nong Xiao, Yutong Lu, Zhiguang Chen

CCF Trans. High Perform. Comput., 2022

A parameter-free deep embedded clustering method for single-cell RNA-seq data.

Yuansong Zeng, Zhuoyi Wei, Fengqi Zhong, Zixiang Pan, Yutong Lu, Yuedong Yang

Briefings Bioinform., 2022

Spatial transcriptomics prediction from histology jointly through Transformer and graph neural networks.

Yuansong Zeng, Zhuoyi Wei, Weijiang Yu, Rui Yin, Yuchen Yuan, Bingling Li, Zhonghui Tang, Yutong Lu, Yuedong Yang

Briefings Bioinform., 2022

A robust and scalable graph neural network for accurate single-cell classification.

Yuansong Zeng, Zhuoyi Wei, Zixiang Pan, Yutong Lu, Yuedong Yang

Briefings Bioinform., 2022

LayoutLMv3: Pre-training for Document AI with Unified Text and Image Masking.

Yupan Huang, Tengchao Lv, Lei Cui, Yutong Lu, Furu Wei

Proceedings of the MM '22: The 30th ACM International Conference on Multimedia, Lisboa, Portugal, October 10, 2022

RollBin: reducing code-size via loop rerolling at binary level.

Tianao Ge, Zewei Mo, Kan Wu, Xianwei Zhang, Yutong Lu

Proceedings of the LCTES '22: 23rd ACM SIGPLAN/SIGBED International Conference on Languages, 2022

Optimized MPI collective algorithms for dragonfly topology.

Guangnan Feng, Dezun Dong, Yutong Lu

Proceedings of the ICS '22: 2022 International Conference on Supercomputing, Virtual Event, June 28, 2022

Handling heavy-tailed input of transformer inference on GPUs.

Jiangsu Du, Jiazhi Jiang, Yang You, Dan Huang, Yutong Lu

Proceedings of the ICS '22: 2022 International Conference on Supercomputing, Virtual Event, June 28, 2022

Characterizing and Optimizing Transformer Inference on ARM Many-core Processor.

Jiazhi Jiang, Jiangsu Du, Dan Huang, Dongsheng Li, Jiang Zheng, Yutong Lu

Proceedings of the 51st International Conference on Parallel Processing, 2022

Exploiting data locality in memory for ORAM to reduce memory access overheads.

Jinxi Kuang, Minghua Shen, Yutong Lu, Nong Xiao

Proceedings of the DAC '22: 59th ACM/IEEE Design Automation Conference, San Francisco, California, USA, July 10, 2022

moTuner: a compiler-based auto-tuning approach for mixed-precision operators.

Zewei Mo, Zejia Lin, Xianwei Zhang, Yutong Lu

Proceedings of the CF '22: 19th ACM International Conference on Computing Frontiers, Turin, Italy, May 17, 2022

RAISE: Efficient GPU Resource Management via Hybrid Scheduling.

Yue Weng, Tianao Ge, Xi Zhang, Xianwei Zhang, Yutong Lu

Proceedings of the 22nd IEEE International Symposium on Cluster, 2022

2021

A Location-Based Factorization Machine Model for Web Service QoS Prediction.

Yatao Yang, Zibin Zheng, Xiangdong Niu, Mingdong Tang, Yutong Lu, Xiangke Liao

IEEE Trans. Serv. Comput., 2021

A Parallel Structured Divide-and-Conquer Algorithm for Symmetric Tridiagonal Eigenvalue Problems.

Xia Liao, Shengguo Li, Yutong Lu, José E. Román

IEEE Trans. Parallel Distributed Syst., 2021

Model Parallelism Optimization for Distributed Inference Via Decoupled CNN Structure.

Jiangsu Du, Xin Zhu, Minghua Shen, Yunfei Du, Yutong Lu, Nong Xiao, Xiangke Liao

IEEE Trans. Parallel Distributed Syst., 2021

A GPU-Accelerated In-Memory Metadata Management Scheme for Large-Scale Parallel File Systems.

Zhiguang Chen, Yu-Bo Liu, Yong-Feng Wang, Yutong Lu

J. Comput. Sci. Technol., 2021

Krill: a compiler and runtime system for concurrent graph processing.

Hongzheng Chen, Minghua Shen, Nong Xiao, Yutong Lu

Proceedings of the International Conference for High Performance Computing, 2021

DeepPE: Emulating Parameterization in Numerical Weather Forecast Model Through Bidirectional Network.

Fengyang Xu, Wencheng Shi, Yunfei Du, Zhiguang Chen, Yutong Lu

Proceedings of the Machine Learning and Knowledge Discovery in Databases. Applied Data Science Track, 2021

Unifying Multimodal Transformer for Bi-directional Image and Text Generation.

Yupan Huang, Hongwei Xue, Bei Liu, Yutong Lu

Proceedings of the MM '21: ACM Multimedia Conference, Virtual Event, China, October 20, 2021

A Picture is Worth a Thousand Words: A Unified System for Diverse Captions and Rich Images Generation.

Yupan Huang, Bei Liu, Jianlong Fu, Yutong Lu

Proceedings of the MM '21: ACM Multimedia Conference, Virtual Event, China, October 20, 2021

Be Specific, Be Clear: Bridging Machine and Human Captions by Scene-Guided Transformer.

Yupan Huang, Zhaoyang Zeng, Yutong Lu

Proceedings of the MMPT@ICMR2021: Proceedings of the 2021 Workshop on Multi-Modal Pre-Training for Multimedia Understanding, 2021

A Fine-grained Optimization to Winograd Convolution Based on Micro-architectural Features of CPU.

Xiaofeng Chen, Zhiguang Chen, Yutong Lu, Dan Huang

Proceedings of the 2021 IEEE Intl Conf on Parallel & Distributed Processing with Applications, Big Data & Cloud Computing, Sustainable Computing & Communications, Social Computing & Networking (ISPA/BDCloud/SocialCom/SustainCom), New York City, NY, USA, September 30, 2021

Optimizing Massively Parallel Winograd Convolution on ARM Processor.

Dongsheng Li, Dan Huang, Zhiguang Chen, Yutong Lu

Proceedings of the ICPP 2021: 50th International Conference on Parallel Processing, Lemont, IL, USA, August 9, 2021

Self-Motivated Communication Agent for Real-World Vision-Dialog Navigation.

Yi Zhu, Yue Weng, Fengda Zhu, Xiaodan Liang, Qixiang Ye, Yutong Lu, Jianbin Jiao

Proceedings of the 2021 IEEE/CVF International Conference on Computer Vision, 2021

DGAT-onco: A differential analysis method to detect oncogenes by integrating functional information of mutations.

Haoyang Zhang, Junkang Wei, Zifeng Liu, Xun Liu, Yutian Chong, Yutong Lu, Huiying Zhao, Yuedong Yang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

Multi-Layer Networks for Ensemble Precipitation Forecasts Postprocessing.

Fengyang Xu, Guanbin Li, Yunfei Du, Zhiguang Chen, Yutong Lu

Proceedings of the Thirty-Fifth AAAI Conference on Artificial Intelligence, 2021

2020

Memory-Efficient and Skew-Tolerant MapReduce Over MPI for Supercomputing Systems.

Tao Gao, Yanfei Guo, Boyu Zhang, Pietro Cicotti, Yutong Lu, Pavan Balaji, Michela Taufer

IEEE Trans. Parallel Distributed Syst., 2020

High-Scalable Collaborated Parallel Framework for Large-Scale Molecular Dynamic Simulation on Tianhe-2 Supercomputer.

Shaoliang Peng, Xiaoyu Zhang, Wenhe Su, Dong Dong, Yutong Lu, Xiangke Liao, Kai Lu, Canqun Yang, Jie Liu, Weiliang Zhu, Dongqing Wei

IEEE ACM Trans. Comput. Biol. Bioinform., 2020

Validation of Fully Automatic Quantitative Software for Finger Joint Space Narrowing Progression for Rheumatoid Arthritis Patients.

Chiaki Narisawa, Kenneth Sutherland, Yutong Lu, Akira Furusaki, Akira Sagawa, Tamotsu Kamishima

J. Digit. Imaging, 2020

Design and Implementation of the Tianhe-2 Data Storage and Management System.

Yutong Lu, Peng Cheng, Zhiguang Chen

J. Comput. Sci. Technol., 2020

Accurately Predicting Mutation-Caused Stability Changes from Protein Sequences Using Extreme Gradient Boosting.

Xuan Lv, Jianwen Chen, Yutong Lu, Zhiguang Chen, Nong Xiao, Yuedong Yang

J. Chem. Inf. Model., 2020

To Improve Protein Sequence Profile Prediction through Image Captioning on Pairwise Residue Distance Map.

Sheng Chen, Zhe Sun, Lihua Lin, Zifeng Liu, Xun Liu, Yutian Chong, Yutong Lu, Huiying Zhao, Yuedong Yang

J. Chem. Inf. Model., 2020

SPOT-Fold: Fragment-Free Protein Structure Prediction Guided by Predicted Backbone Structure and Contact Map.

Yufeng Cai, Xiongjun Li, Zhe Sun, Yutong Lu, Huiying Zhao, Jack Hanson, Kuldip K. Paliwal, Thomas Litfin, Yaoqi Zhou, Yuedong Yang

J. Comput. Chem., 2020

An Efficient Method for Training Deep Learning Networks Distributed.

Chenxu Wang, Yutong Lu, Zhiguang Chen, Junnan Li

IEICE Trans. Inf. Syst., 2020

A parallel generator of non-Hermitian matrices computed from given spectra.

Xinzhe Wu, Serge G. Petiton, Yutong Lu

Concurr. Comput. Pract. Exp., 2020

UniIndex: An index and query middleware for parallel file systems.

Peng Cheng, Yong Wang, Yutong Lu, Yunfei Du, Zhiguang Chen

Concurr. Comput. Pract. Exp., 2020

HasFS: optimizing file system consistency mechanism on NVM-based hybrid storage architecture.

Yubo Liu, Hongbo Li, Yutong Lu, Zhiguang Chen, Nong Xiao, Ming Zhao

Clust. Comput., 2020

Improving the efficiency of HPC data movement on container-based virtual cluster.

Dan Huang, Yutong Lu

CCF Trans. High Perform. Comput., 2020

Accurate prediction of genome-wide RNA secondary structure profile based on extreme gradient boosting.

Yaobin Ke, Jiahua Rao, Huiying Zhao, Yutong Lu, Nong Xiao, Yuedong Yang

Bioinform., 2020

Traveling the token world: A graph analysis of Ethereum ERC20 token ecosystem.

Weili Chen, Tuo Zhang, Zhiguang Chen, Zibin Zheng, Yutong Lu

Proceedings of the WWW '20: The Web Conference 2020, Taipei, Taiwan, April 20-24, 2020, 2020

Re-evaluation of Atomic Operations and Graph Coloring for Unstructured Finite Volume GPU Simulations.

Xi Zhang, Xu Sun, Xiaohu Guo, Yunfei Du, Yutong Lu, Yang Liu

Proceedings of the 32nd IEEE International Symposium on Computer Architecture and High Performance Computing, 2020

Pacon: Improving Scalability and Efficiency of Metadata Service through Partial Consistency.

Yubo Liu, Yutong Lu, Zhiguang Chen, Ming Zhao

Proceedings of the 2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS), 2020

Communicative Representation Learning on Attributed Molecular Graphs.

Ying Song, Shuangjia Zheng, Zhangming Niu, Zhang-Hua Fu, Yutong Lu, Yuedong Yang

Proceedings of the Twenty-Ninth International Joint Conference on Artificial Intelligence, 2020

Phishing Scam Detection on Ethereum: Towards Financial Security for Blockchain Ecosystem.

Weili Chen, Xiongfeng Guo, Zhiguang Chen, Zibin Zheng, Yutong Lu

Proceedings of the Twenty-Ninth International Joint Conference on Artificial Intelligence, 2020

Multimodal Brain MRI Translation Focused on Lesions.

Yili Qu, Chufu Deng, Wanqi Su, Ying Wang, Yutong Lu, Zhiguang Chen

Proceedings of the ICMLC 2020: 2020 12th International Conference on Machine Learning and Computing, 2020

Synthesis of Registered Multimodal Medical Images with Lesions.

Yili Qu, Wanqi Su, Xuan Lv, Chufu Deng, Ying Wang, Yutong Lu, Zhiguang Chen, Nong Xiao

Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2020, 2020

An Efficient Approach to Vectorize the Hybrid Breadth-First Search.

Chi Zhu, Weixuan Shi, Zhiguang Chen, Nong Xiao, Yutong Lu

Proceedings of the 22nd IEEE International Conference on High Performance Computing and Communications; 18th IEEE International Conference on Smart City; 6th IEEE International Conference on Data Science and Systems, 2020

Accurately Clustering Single-cell RNA-seq data by Capturing Structural Relations between Cells through Graph Convolutional Network.

Yuansong Zeng, Xiang Zhou, Jiahua Rao, Yutong Lu, Yuedong Yang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

An End-to-end Oxford Nanopore Basecaller Using Convolution-augmented Transformer.

Xuan Lv, Zhiguang Chen, Yutong Lu, Yuedong Yang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019

A novel in situ compression method for CFD data based on generative adversarial network.

Yang Liu, Yueqing Wang, Liang Deng, Fang Wang, Fang Liu, Yutong Lu, Sikun Li

J. Vis., 2019

QBMG: quasi-biogenic molecule generator with deep recurrent neural network.

Shuangjia Zheng, Xin Yan, Qiong Gu, Yuedong Yang, Yunfei Du, Yutong Lu, Jun Xu

J. Cheminformatics, 2019

DLIGAND2: an improved knowledge-based energy function for protein-ligand interactions using the distance-scaled, finite, ideal-gas reference state.

Pin Chen, Yaobin Ke, Yutong Lu, Yunfei Du, Jiahui Li, Hui Yan, Huiying Zhao, Yaoqi Zhou, Yuedong Yang

J. Cheminformatics, 2019

An efficient real-time data collection framework on petascale systems.

Huang Huang, Li-Qian Zhou, Yutong Lu, Tong Xiao, Can Leng, Chuanying Li, Zhe Quan

Neurocomputing, 2019

Tiered data management system: Accelerating data processing on HPC systems.

Peng Cheng, Yutong Lu, Yunfei Du, Zhiguang Chen

Future Gener. Comput. Syst., 2019

Paving the way for China exascale computing.

Yutong Lu

CCF Trans. High Perform. Comput., 2019

Capability for Multi-Core and Many-Core Memory Systems: A Case-Study With Xeon Processors.

Yuxuan Xing, Fang Liu, Nong Xiao, Zhiguang Chen, Yutong Lu

IEEE Access, 2019

Optimizing Data Placement on Hierarchical Storage Architecture via Machine Learning.

Peng Cheng, Yutong Lu, Yunfei Du, Zhiguang Chen, Yang Liu

Proceedings of the Network and Parallel Computing, 2019

Decoupling Localization and Classification in Single Shot Temporal Action Detection.

Yupan Huang, Qi Dai, Yutong Lu

Proceedings of the IEEE International Conference on Multimedia and Expo, 2019

An Efficient and Flexible Metadata Management Layer for Local File Systems.

Yubo Liu, Hongbo Li, Yutong Lu, Zhiguang Chen, Ming Zhao

Proceedings of the 37th IEEE International Conference on Computer Design, 2019

Bi-Cluster: A High-Performance Data Query Framework for Large-Scale Scientific Data.

Yixian Shen, Cheng Peng, Yunfei Du, Yutong Lu

Proceedings of the 21st IEEE International Conference on High Performance Computing and Communications; 17th IEEE International Conference on Smart City; 5th IEEE International Conference on Data Science and Systems, 2019

An Efficient Data Collection Module on Petascale Systems.

Huang Huang, Tong Xiao, Chuanying Li, Can Leng, Yutong Lu

Proceedings of the 21st IEEE International Conference on High Performance Computing and Communications; 17th IEEE International Conference on Smart City; 5th IEEE International Conference on Data Science and Systems, 2019

IndexIt: Enhancing Data Locating Services for Parallel File Systems.

Peng Cheng, Yong Wang, Yutong Lu, Yunfei Du, Zhiguang Chen

Proceedings of the 21st IEEE International Conference on High Performance Computing and Communications; 17th IEEE International Conference on Smart City; 5th IEEE International Conference on Data Science and Systems, 2019

An Active and Deep Semantic Matching Framework for Query Rewrite in E-Commercial Search Engine.

Yatao Yang, Jun Tan, Hongbo Deng, Zibin Zheng, Yutong Lu, Xiangke Liao

Proceedings of the 28th ACM International Conference on Information and Knowledge Management, 2019

2018

mSNP: A Massively Parallel Algorithm for Large-Scale SNP Detection.

Yingbo Cui, Shaoliang Peng, Yutong Lu, Xiaoqian Zhu, Bingqiang Wang, Chengkun Wu, Xiangke Liao

IEEE Trans. Parallel Distributed Syst., 2018

Petascale scramjet combustion simulation on the Tianhe-2 heterogeneous supercomputer.

Yonggang Che, Meifang Yang, Chuanfu Xu, Yutong Lu

Parallel Comput., 2018

Erratum to: ONFS: a hierarchical hybrid file system based on memory, SSD, and HDD for high performance computers.

Xin Liu, Yutong Lu, Jie Yu, Peng-Fei Wang, Jieting Wu, Ying Lu

Frontiers Inf. Technol. Electron. Eng., 2018

Will supercomputers be super-data and super-AI machines?

Yutong Lu, Depei Qian, Haohuan Fu, Wenguang Chen

Commun. ACM, 2018

Efficient computation of motif discovery on Intel Many Integrated Core (MIC) Architecture.

Shaoliang Peng, Minxia Cheng, Kaiwen Huang, Yingbo Cui, Zhiqiang Zhang, Runxin Guo, Xiaoyu Zhang, Shunyun Yang, Xiangke Liao, Yutong Lu, Quan Zou, Benyun Shi

BMC Bioinform., 2018

Graph Analytics on Manycore Memory Systems.

Yuxuan Xing, Zhiguang Chen, Nong Xiao, Fang Liu, Yutong Lu

IEEE Access, 2018

SingleCaffe: An Efficient Framework for Deep Learning on a Single Node.

Chenxu Wang, Yixian Shen, Jia Jia, Yutong Lu, Zhiguang Chen, Bo Wang

IEEE Access, 2018

Experiences of Converging Big Data Analytics Frameworks with High Performance Computing Systems.

Peng Cheng, Yutong Lu, Yunfei Du, Zhiguang Chen

Proceedings of the Supercomputing Frontiers - 4th Asian Conference, 2018

Mimir+: An Optimized Framework of MapReduce on Heterogeneous High-Performance Computing System.

Nan Hu, Zhiguang Chen, Yunfei Du, Yutong Lu

Proceedings of the Network and Parallel Computing, 2018

On the Power of Combiner Optimizations in MapReduce Over MPI Workflows.

Tao Gao, Yanfei Guo, Boyu Zhang, Pietro Cicotti, Yutong Lu, Pavan Balaji, Michela Taufer

Proceedings of the 24th IEEE International Conference on Parallel and Distributed Systems, 2018

A Low Communication Overhead Breadth-First Search Based on Global Bitmap.

Ziwei Peng, Yutong Lu, Zhiguang Cheng, Yunfei Du

Proceedings of the Algorithms and Architectures for Parallel Processing, 2018

DistForest: A Parallel Random Forest Training Framework Based on Supercomputer.

Chenxu Wang, Tingting Cai, Guang Suo, Yutong Lu, Enqiang Zhou

Proceedings of the 20th IEEE International Conference on High Performance Computing and Communications; 16th IEEE International Conference on Smart City; 4th IEEE International Conference on Data Science and Systems, 2018

Accelerating Scientific Workflows with Tiered Data Management System.

Peng Cheng, Yutong Lu, Yunfei Du, Zhiguang Chen

Proceedings of the 20th IEEE International Conference on High Performance Computing and Communications; 16th IEEE International Conference on Smart City; 4th IEEE International Conference on Data Science and Systems, 2018

2017

ONFS: a hierarchical hybrid file system based on memory, SSD, and HDD for high performance computers.

Xin Liu, Yutong Lu, Jie Yu, Peng-Fei Wang, Jieting Wu, Ying Lu

Frontiers Inf. Technol. Electron. Eng., 2017

Multiple Sequence Alignment Based on a Suffix Tree and Center-Star Strategy: A Linear Method for Multiple Nucleotide Sequence Alignment on Spark Parallel Framework.

Wenhe Su, Xiangke Liao, Yutong Lu, Quan Zou, Shaoliang Peng

J. Comput. Biol., 2017

PTS: a pharmaceutical target seeker.

Peng Ding, Xin Yan, Zhihong Liu, Jiewen Du, Yunfei Du, Yutong Lu, Di Wu, Yuehua Xu, Huihao Zhou, Qiong Gu, Jun Xu

Database J. Biol. Databases Curation, 2017

Fast Truss Decomposition in Memory.

Yuxuan Xing, Nong Xiao, Yutong Lu, Ronghua Li, Songping Yu, Siqi Gao

Proceedings of the Security, Privacy, and Anonymity in Computation, Communication, and Storage, 2017

Customized Filesystem with Dynamic Stripe Strategies on Lustre-Based Hadoop.

Hongbo Li, Yuxuan Xing, Nong Xiao, Zhiguang Chen, Yutong Lu

Proceedings of the Parallel Architecture, Algorithm and Programming, 2017

Mimir: Memory-Efficient and Scalable MapReduce for Large Supercomputing Systems.

Tao Gao, Yanfei Guo, Boyu Zhang, Pietro Cicotti, Yutong Lu, Pavan Balaji, Michela Taufer

Proceedings of the 2017 IEEE International Parallel and Distributed Processing Symposium, 2017

Bloomfish: A Highly Scalable Distributed K-mer Counting Framework.

Tao Gao, Yanfei Guo, Yanjie Wei, Bingqiang Wang, Yutong Lu, Pietro Cicotti, Pavan Balaji, Michela Taufer

Proceedings of the 23rd IEEE International Conference on Parallel and Distributed Systems, 2017

A Data Mining Method for Potential Fire Hazard Analysis of Urban Buildings based on Bayesian Network.

Xin Liu, Yutong Lu, Zijun Xia, Feifei Li, Tianqi Zhang

Proceedings of the 2nd International Conference on Intelligent Information Processing, 2017

UGSD: Scalable and Efficient Metadata Management for EB-Scale File Systems.

Xin Liu, Yutong Lu, Chunjia Wu, Jieting Wu, Yachao Shao

Proceedings of the International Conference on Compute and Data Analysis, 2017

Accelerating Redis with RDMA Over InfiniBand.

Wenhui Tang, Yutong Lu, Nong Xiao, Fang Liu, Zhiguang Chen

Proceedings of the Data Mining and Big Data - Second International Conference, 2017

Review on HDD-Based, SSD-Based and Hybrid Key-Value Stores.

Juan Li, Nong Xiao, Yutong Lu, Zhiguang Chen, Fang Liu, Yuxuan Xing, Shuo Li

Proceedings of the 15th IEEE Intl Conf on Dependable, 2017

mD3DOCKxb: An Ultra-Scalable CPU-MIC Coordinated Virtual Screening Framework.

Shaoliang Peng, Xiaoyu Zhang, Shunyun Yang, Wenhe Su, Zhiqiang Zhang, Dong Dong, Kai Lu, Yutong Lu, Xiangke Liao, Bertil Schmidt, Weiliang Zhu, Kuan-Ching Li

Proceedings of the 17th IEEE/ACM International Symposium on Cluster, 2017

2016

Workload Partitioning for Accelerating Applications on Heterogeneous Platforms.

Jie Shen, Ana Lucia Varbanescu, Yutong Lu, Peng Zou, Henk J. Sips

IEEE Trans. Parallel Distributed Syst., 2016

Me-CLOCK: A Memory-Efficient Framework to Implement Replacement Policies for Large Caches.

Zhiguang Chen, Nong Xiao, Yutong Lu, Fang Liu

IEEE Trans. Computers, 2016

623 Tflop/s HPCG run on Tianhe-2: Leveraging millions of hybrid cores.

Yiqung Liu, Chao Yang, Fangfang Liu, Xianyi Zhang, Yutong Lu, Yunfei Du, Canqun Yang, Min Xie, Xiangke Liao

Int. J. High Perform. Comput. Appl., 2016

RFS: An LSM-Tree-Based File System for Enhanced Microdata Performance.

Lixin Wang, Yutong Lu, Wei Zhang, Yan Lei

IEICE Trans. Inf. Syst., 2016

Distributed and Scalable Directory Service in a Parallel File System.

Lixin Wang, Yutong Lu, Wei Zhang, Yan Lei

IEICE Trans. Inf. Syst., 2016

A Configuration Management Study to Fast Massive Writing for Distributed NoSQL System.

Xianqiang Bao, Nong Xiao, Yutong Lu, Zhiguang Chen

IEICE Trans. Inf. Syst., 2016

Using Dynamic Granularity Strategy to Accelerate Unbalanced Tree Search.

Lei Guan, Yutong Lu

Proceedings of the 2016 IEEE Trustcom/BigDataSE/ISPA, 2016

The Gyrokinetic Particle Simulation of Fusion Plasmas on Tianhe-2 Supercomputer.

Endong Wang, Shaohua Wu, Qing Zhang, Jun Liu, Wenlu Zhang, Zhihong Lin, Yutong Lu, Yunfei Du, Xiaoqian Zhu

Proceedings of the 7th Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems, 2016

Persistence and Recovery for In-Memory NoSQL Services: A Measurement Study.

Xianqiang Bao, Ling Liu, Nong Xiao, Yutong Lu, Wenqi Cao

Proceedings of the IEEE International Conference on Web Services, 2016

Accelerating the Simulation of Thermal Convection in the Earth's Outer Core on Tianhe-2.

Changmao Wu, Fangfang Liu, Chao Yang, Ligang Li, Haitao Zhao, Yutong Lu, Leisheng Li, Yunfei Du

Proceedings of the 22nd IEEE International Conference on Parallel and Distributed Systems, 2016

masFS: File System Based on Memory and SSD in Compute Nodes for High Performance Computers.

Xin Liu, Ying Lu, Yutong Lu, Chunjia Wu, Jieting Wu

Proceedings of the 22nd IEEE International Conference on Parallel and Distributed Systems, 2016

mAMBER: A CPU/MIC collaborated parallel framework for AMBER on Tianhe-2 supercomputer.

Shaoliang Peng, Xiaoyu Zhang, Yutong Lu, Xiangke Liao, Kai Lu, Canqun Yang, Jie Liu, Weiliang Zhu, Dongqing Wei

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

2015

Ultra-Scalable CPU-MIC Acceleration of Mesoscale Atmospheric Modeling on Tianhe-2.

Wei Xue, Chao Yang, Haohuan Fu, Xinliang Wang, Yangtong Xu, Junfeng Liao, Lin Gan, Yutong Lu, Rajiv Ranjan, Lizhe Wang

IEEE Trans. Computers, 2015

Neo-hetergeneous Programming and Parallelized Optimization of a Human Genome Re-sequencing Analysis Software Pipeline on TH-2 Supercomputer.

Xiangke Liao, Shaoliang Peng, Yutong Lu, Yingbo Cui, Chengkun Wu, Heng Wang, Jiajun Wen

Supercomput. Front. Innov., 2015

High Performance Interconnect Network for Tianhe System.

Xiangke Liao, Zhengbin Pang, Kefei Wang, Yutong Lu, Min Xie, Jun Xia, Dezun Dong, Guang Suo

J. Comput. Sci. Technol., 2015

CoGA: Extension of GA on Heterogeneous System.

Peng Cheng, Yutong Lu, Tao Gao, Chenxu Wang

Proceedings of the 2015 IEEE 12th Intl Conf on Ubiquitous Intelligence and Computing and 2015 IEEE 12th Intl Conf on Autonomic and Trusted Computing and 2015 IEEE 15th Intl Conf on Scalable Computing and Communications and Its Associated Workshops (UIC-ATC-ScalCom), 2015

BWTCP: A Parallel Method for Constructing BWT in Large Collection of Genomic Reads.

Heng Wang, Shaoliang Peng, Yutong Lu, Chengkun Wu, Jiajun Wen, Jie Liu, Xiaoqian Zhu

Proceedings of the High Performance Computing - 30th International Conference, 2015

Large-Scale Neo-Heterogeneous Programming and Optimization of SNP Detection on Tianhe-2.

Yingbo Cui, Xiangke Liao, Shaoliang Peng, Yutong Lu, Canqun Yang, Bingqiang Wang, Chengkun Wu

Proceedings of the High Performance Computing - 30th International Conference, 2015

A theoretical analysis of lifespan impact on flash memory imposed by erasure code.

Enqiang Zhou, Yutong Lu, Nong Xiao, Yang Ou, Zhiguang Chen, Xianqiang Bao

Proceedings of the 10th IEEE International Conference on Networking, 2015

Thresholds modification strategy of wayside supercapacitor storage considering DC substation characteristics.

Junxing Wang, Zhongping Yang, Fei Lin, Yajie Zhao, Huan Xia, Yutong Lu, Xiaohao Zhao

Proceedings of the IECON 2015, 2015

Performance Evaluation of HPGMG on Tianhe-2: Early Experience.

Yulong Ao, Yiqung Liu, Chao Yang, Fangfang Liu, Peng Zhang, Yutong Lu, Yunfei Du

Proceedings of the Algorithms and Architectures for Parallel Processing, 2015

The Challenge of Scaling Genome Big Data Analysis Software on TH-2 Supercomputer.

Shaoliang Peng, Xiangke Liao, Canqun Yang, Yutong Lu, Jie Liu, Yingbo Cui, Heng Wang, Chengkun Wu, Bingqiang Wang

Proceedings of the 15th IEEE/ACM International Symposium on Cluster, 2015

HAGP: A Hub-Centric Asynchronous Graph Processing Framework for Scale-Free Graph.

Tao Gao, Yutong Lu, Baida Zhang

Proceedings of the 15th IEEE/ACM International Symposium on Cluster, 2015

mD3DOCKxb: A Deep Parallel Optimized Software for Molecular Docking with Intel Xeon Phi Coprocessors.

Qian Cheng, Shaoliang Peng, Yutong Lu, Weiliang Zhu, Zhijian Xu, Xinben Zhang

Proceedings of the 15th IEEE/ACM International Symposium on Cluster, 2015

2014

A hybrid memory built by SSD and DRAM to support in-memory Big Data analytics.

Zhiguang Chen, Yutong Lu, Nong Xiao, Fang Liu

Knowl. Inf. Syst., 2014

Using the Intel Many Integrated Core to accelerate graph traversal.

Tao Gao, Yutong Lu, Baida Zhang, Guang Suo

Int. J. High Perform. Comput. Appl., 2014

Hybrid hierarchy storage system in MilkyWay-2 supercomputer.

Weixia Xu, Yutong Lu, Qiong Li, Enqiang Zhou, Zhenlong Song, Yong Dong, Wei Zhang, Dengping Wei, Xiaoming Zhang, Haitao Chen, Jianying Xing, Yuan Yuan

Frontiers Comput. Sci., 2014

MilkyWay-2 supercomputer: system and application.

Xiangke Liao, Liquan Xiao, Canqun Yang, Yutong Lu

Frontiers Comput. Sci., 2014

Efficient Shared-Memory Implementation of High-Performance Conjugate Gradient Benchmark and its Application to Unstructured Matrices.

Jongsoo Park, Mikhail Smelyanskiy, Karthikeyan Vaidyanathan, Alexander Heinecke, Dhiraj D. Kalamkar, Xing Liu, Md. Mostofa Ali Patwary, Yutong Lu, Pradeep Dubey

Proceedings of the International Conference for High Performance Computing, 2014

Enabling and Scaling a Global Shallow-Water Atmospheric Model on Tianhe-2.

Wei Xue, Chao Yang, Haohuan Fu, Xinliang Wang, Yangtong Xu, Lin Gan, Yutong Lu, Xiaoqian Zhu

Proceedings of the 2014 IEEE 28th International Parallel and Distributed Processing Symposium, 2014

Scalability­-Centric HPC System Design.

Yutong Lu

Proceedings of the 2014 IEEE 28th International Parallel and Distributed Processing Symposium, 2014

Improving performance by matching imbalanced workloads with heterogeneous platforms.

Jie Shen, Ana Lucia Varbanescu, Peng Zou, Yutong Lu, Henk J. Sips

Proceedings of the 2014 International Conference on Supercomputing, 2014

Physically based parallel ray tracer for the Metropolis light transport algorithm on the Tianhe-2 supercomputer.

Changmao Wu, Yunquan Zhang, Congli Yang, Yutong Lu

Proceedings of the 20th IEEE International Conference on Parallel and Distributed Systems, 2014

Accelerating HPCG on Tianhe-2: A hybrid CPU-MIC algorithm.

Yiqung Liu, Xianyi Zhang, Chao Yang, Fangfang Liu, Yutong Lu

Proceedings of the 20th IEEE International Conference on Parallel and Distributed Systems, 2014

Optimizing and Scaling HPCG on Tianhe-2: Early Experience.

Xianyi Zhang, Chao Yang, Fangfang Liu, Yiqung Liu, Yutong Lu

Proceedings of the Algorithms and Architectures for Parallel Processing, 2014

Ensemble based data stream mining with recalling and forgetting mechanisms.

Yanhuang Jiang, Qiangli Zhao, Yutong Lu

Proceedings of the 11th International Conference on Fuzzy Systems and Knowledge Discovery, 2014

2013

A peta-scalable CPU-GPU algorithm for global atmospheric simulations.

Chao Yang, Wei Xue, Haohuan Fu, Lin Gan, Linfeng Li, Yangtong Xu, Yutong Lu, Jiachang Sun, Guangwen Yang, Weimin Zheng

Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, 2013

Using MIC to Accelerate a Typical Data-Intensive Application: The Breadth-first Search.

Tao Gao, Yutong Lu, Guang Suo

Proceedings of the 2013 IEEE International Symposium on Parallel & Distributed Processing, 2013

NR-MPI: A Non-stop and Fault Resilient MPI.

Guang Suo, Yutong Lu, Xiangke Liao, Min Xie, Hongjia Cao

Proceedings of the 19th IEEE International Conference on Parallel and Distributed Systems, 2013

Somersault cloud: Toward a cloud-of-clouds service for personal backup.

Huajian Mao, Nong Xiao, Yutong Lu, Haifeng Xu

Proceedings of the International Conference on Computing, Networking and Communications, 2013

2012

Tianhe-1A Interconnect and Message-Passing Services.

Min Xie, Yutong Lu, Kefei Wang, Lu Liu, Hongjia Cao, Xuejun Yang

IEEE Micro, 2012

Wukong: A cloud-oriented file service for mobile Internet devices.

Huajian Mao, Nong Xiao, Weisong Shi, Yutong Lu

J. Parallel Distributed Comput., 2012

EaSync: A Transparent File Synchronization Service across Multiple Machines.

Huajian Mao, Hang Zhang, Xianqiang Bao, Nong Xiao, Weisong Shi, Yutong Lu

Proceedings of the Network and Parallel Computing, 9th IFIP International Conference, 2012

RAIC: Redundant Array of Inexpensive Cloud.

Huajian Mao, Nong Xiao, Yutong Lu

Proceedings of the Convergence and Hybrid Information Technology, 2012

A Power-aware Job Scheduling Algorithm.

Haitao Chen, Yutong Lu, Qinghua Zhu

Proceedings of the 2012 International Conference on Cloud and Service Computing, 2012

2011

Implementation and Evaluation of Network Interface and Message Passing Services for TianHe-1A Supercomputer.

Min Xie, Yutong Lu, Lu Liu, Hongjia Cao, Xuejun Yang

Proceedings of the IEEE 19th Annual Symposium on High Performance Interconnects, 2011

2010

Wukong: Toward a Cloud-Oriented File Service for Mobile Devices.

Huajian Mao, Nong Xiao, Weisong Shi, Yutong Lu

Proceedings of the 2010 IEEE International Conference on Services Computing, 2010

2009

A Distributed file system framework for transparent accessing heterogeneous storage services.

Yutong Lu, Huajian Mao, Jie Shen

Proceedings of the 23rd IEEE International Symposium on Parallel and Distributed Processing, 2009

Heterogeneity Issues and Supports in MPI Implementations: An Overview.

Yan-Huang Jiang, Qiang-Li Zhao, Yutong Lu, Xue-Jun Yang

Proceedings of the Eighth International Conference on Grid and Cooperative Computing, 2009

2008

Scalable Resource Management System for High Productive Computing.

Yutong Lu, Nong Xiao, Xuejun Yang

Proceedings of the Third ChinaGrid Annual Conference, ChinaGrid 2008, Dunhuang, Gansu, 2008

2006

A New Heartbeat Mechanism for Large-Scale Cluster.

Yutong Lu, Min Wang, Nong Xiao

Proceedings of the Advanced Web and Network Technologies, and Applications, 2006

2005

MCRM System: CIM-Based Multiple Clusters Manager.

Yutong Lu, Zhiyu Shen, Enqiang Zhou, Min Zhu

Proceedings of the Parallel and Distributed Processing and Applications, 2005