Raul Rabadan

Orcid: 0000-0001-7946-9255

According to our database1, Raul Rabadan authored at least 26 papers between 2010 and 2022.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
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PhD thesis 
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Links

On csauthors.net:

Bibliography

2022
The Holdout Randomization Test for Feature Selection in Black Box Models.
J. Comput. Graph. Stat., 2022

2021
Topology identifies emerging adaptive mutations in SARS-CoV-2.
CoRR, 2021

2020
Quantifying Genetic Innovation: Mathematical Foundations for the Topological Study of Reticulate Evolution.
SIAM J. Appl. Algebra Geom., 2020

A Random Matrix Theory Approach to Denoise Single-Cell Data.
Patterns, 2020

MREC: a fast and versatile framework for aligning and matching point clouds with applications to single cell molecular data.
CoRR, 2020

arcasHLA: high-resolution HLA typing from RNAseq.
Bioinform., 2020

Persistent Homology Based Characterization of the Breast Cancer Immune Microenvironment: A Feasibility Study.
Proceedings of the 36th International Symposium on Computational Geometry, 2020

2019
Longitudinal molecular trajectories of diffuse glioma in adults.
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Nat., 2019

2018
Topological Data Analysis of Single-cell Hi-C Contact Maps.
CoRR, 2018

Black Box FDR.
Proceedings of the 35th International Conference on Machine Learning, 2018

2016
Inference of Ancestral Recombination Graphs through Topological Data Analysis.
PLoS Comput. Biol., 2016

A Theory of Taxonomy.
CoRR, 2016

2015
A Fast Semi-Automatic Segmentation Tool for Processing Brain Tumor Images.
Proceedings of the Towards Integrative Machine Learning and Knowledge Extraction, 2015

Multiscale Topology of Chromatin Folding.
Proceedings of the BICT 2015, 2015

Quantifying Reticulation in Phylogenetic Complexes Using Homology.
Proceedings of the BICT 2015, 2015

2014
Darwin or Lamarck? Future Challenges in Evolutionary Algorithms for Knowledge Discovery and Data Mining.
Proceedings of the Interactive Knowledge Discovery and Data Mining in Biomedical Informatics, 2014

Pegasus: a comprehensive annotation and prediction tool for detection of driver gene fusions in cancer.
BMC Syst. Biol., 2014

Data-driven discovery of seasonally linked diseases from an Electronic Health Records system.
BMC Bioinform., 2014

Darwin, Lamarck, or Baldwin: Applying Evolutionary Algorithms to Machine Learning Techniques.
Proceedings of the 2014 IEEE/WIC/ACM International Joint Conferences on Web Intelligence (WI) and Intelligent Agent Technologies (IAT), Warsaw, Poland, August 11-14, 2014, 2014

Moduli Spaces of Phylogenetic Trees Describing Tumor Evolutionary Patterns.
Proceedings of the Brain Informatics and Health - International Conference, 2014

Characterizing Scales of Genetic Recombination and Antibiotic Resistance in Pathogenic Bacteria Using Topological Data Analysis.
Proceedings of the Brain Informatics and Health - International Conference, 2014

2013
SAVI: a statistical algorithm for variant frequency identification.
BMC Syst. Biol., 2013

MutComFocal: an integrative approach to identifying recurrent and focal genomic alterations in tumor samples.
BMC Syst. Biol., 2013

2012
Drug-drug interaction through molecular structure similarity analysis.
J. Am. Medical Informatics Assoc., 2012

2011
Facilitating adverse drug event detection in pharmacovigilance databases using molecular structure similarity: application to rhabdomyolysis.
J. Am. Medical Informatics Assoc., 2011

2010
Network Analysis of Global Influenza Spread.
PLoS Comput. Biol., 2010


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