Reagon Karki

According to our database, Reagon Karki authored at least 9 papers between 2016 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

Experimental and machine learning-based exploration of repurposed drugs reveals chemical features underlying phospholipidosis.

Maria Kuzikov, Adelinn Kalman, Reagon Karki, Jeanette Reinshagen, Johanna Huchting, Kun Qian, Hanna Axelsson, Marianna Tampere, Päivi Östling, Brinton Seashore-Ludlow, Yojana Gadiya, Philip Gribbon, Andrea Zaliani

Patterns, 2026

2025

KGG: a fully automated workflow for creating disease-specific knowledge graphs.

Reagon Karki, Yojana Gadiya, Andrea Zaliani, Bishab Pokharel, Negin Sadat Babaiha, Marek Ostaszewski, Martin Hofmann-Apitius, Philip Gribbon

Bioinform., 2025

2024

Curating, Collecting, and Cataloguing Global COVID-19 Datasets for the Aim of Predicting Personalized Risk.

Sepehr Golriz Khatami, Astghik Sargsyan, Maria Francesca Russo, Daniel Domingo-Fernández, Andrea Zaliani, Abish Kaladharan, Priya Sethumadhavan, Sarah Mubeen, Yojana Gadiya, Reagon Karki, Stephan Gebel, Ram Kumar Ruppa Surulinathan, Vanessa Lage-Rupprecht, Saulius Archipovas, Geltrude Mingrone, Marc Jacobs, Carsten Claussen, Martin Hofmann-Apitius, Alpha Tom Kodamullil

Data, 2024

2023

Proposal for a framework of contextual metadata in selected research infrastructures of the life sciences and the social sciences & humanities.

Christian Ohmann, Maria Panagiotopoulou, Steve Canham, Petr Holub, Kurt Majcen, Gary Saunders, Maddalena Fratelli, Jing Tang, Philip Gribbon, Reagon Karki, Mari Kleemola, Katja Moilanen, Daan Broeder, Walter Daelemans, Pieter Fivez

Int. J. Metadata Semant. Ontologies, 2023

2021

Bridging between data and knowledge: New ways to better understand Alzheimer's Disease and Type 2 Diabetes comorbidity

Reagon Karki

PhD thesis, 2021

COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology.

Daniel Domingo-Fernández, Shounak Baksi, Bruce Schultz, Yojana Gadiya, Reagon Karki, Tamara Raschka, Christian Ebeling, Martin Hofmann-Apitius, Alpha Tom Kodamullil

Bioinform., 2021

2019

Quantifying mechanisms in neurodegenerative diseases (NDDs) using candidate mechanism perturbation amplitude (CMPA) algorithm.

Reagon Karki, Alpha Tom Kodamullil, Charles Tapley Hoyt, Martin Hofmann-Apitius

BMC Bioinform., 2019

2017

Multimodal mechanistic signatures for neurodegenerative diseases (NeuroMMSig): a web server for mechanism enrichment.

Daniel Domingo-Fernández, Alpha Tom Kodamullil, Anandhi Iyappan, Mufassra Naz, Mohammad Asif Emon, Tamara Raschka, Reagon Karki, Stephan Springstubbe, Christian Ebeling, Martin Hofmann-Apitius

Bioinform., 2017

2016

Training and evaluation corpora for the extraction of causal relationships encoded in biological expression language (BEL).

Juliane Fluck, Sumit Madan, Sam Ansari, Alpha Tom Kodamullil, Reagon Karki, Majid Rastegar-Mojarad, Natalie L. Catlett, William Hayes, Justyna Szostak, Julia Hoeng, Manuel C. Peitsch

Database J. Biol. Databases Curation, 2016