Rui Kuang

According to our database1, Rui Kuang authored at least 44 papers between 2003 and 2019.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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PhD thesis 
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Links

On csauthors.net:

Bibliography

2019
Path segmentation for movement trajectories with irregular sampling frequency using space-time interpolation and density-based spatial clustering.
Trans. GIS, 2019

Detecting Population-Differentiation Copy Number Variants in Human Population Tree by Sparse Group Selection.
IEEE/ACM Trans. Comput. Biology Bioinform., 2019

Learning a Low-Rank Tensor of Pharmacogenomic Multi-relations from Biomedical Networks.
Proceedings of the 2019 IEEE International Conference on Data Mining, 2019

2018
A multitask clustering approach for single-cell RNA-seq analysis in Recessive Dystrophic Epidermolysis Bullosa.
PLoS Computational Biology, 2018

Scalable Label Propagation for Multi-relational Learning on Tensor Product Graph.
CoRR, 2018

2017
Low-rank Label Propagation for Semi-supervised Learning with 100 Millions Samples.
CoRR, 2017

Transfer learning across ontologies for phenome-genome association prediction.
Bioinformatics, 2017

Dropout Prediction in Home Care Training.
Proceedings of the 10th International Conference on Educational Data Mining, 2017

2015
Network-Based Isoform Quantification with RNA-Seq Data for Cancer Transcriptome Analysis.
PLoS Computational Biology, 2015

Predicting and exploring network components involved in pathogenesis in the malaria parasite via novel subnetwork alignments.
BMC Systems Biology, 2015

SubPatCNV: approximate subspace pattern mining for mapping copy-number variations.
BMC Bioinformatics, 2015

Predicting Small Group Accretion in Social Networks: A topology based incremental approach.
Proceedings of the 2015 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, 2015

2014
Network-based Transcript Quantification with RNA-Seq Data.
CoRR, 2014

2013
Network-based Survival Analysis Reveals Subnetwork Signatures for Predicting Outcomes of Ovarian Cancer Treatment.
PLoS Computational Biology, 2013

A novel subnetwork alignment approach predicts new components of the cell cycle regulatory apparatus in Plasmodium falciparum.
BMC Bioinformatics, 2013

Transfer Learning across Cancers on DNA Copy Number Variation Analysis.
Proceedings of the 2013 IEEE 13th International Conference on Data Mining, 2013

2012
Module-based subnetwork alignments reveal novel transcriptional regulators in malaria parasite Plasmodium falciparum.
BMC Systems Biology, 2012

Global Linear Neighborhoods for Efficient Label Propagation.
Proceedings of the Twelfth SIAM International Conference on Data Mining, 2012

Prioritizing Disease Genes by Bi-Random Walk.
Proceedings of the Advances in Knowledge Discovery and Data Mining, 2012

Sparse Group Selection on Fused Lasso Components for Identifying Group-Specific DNA Copy Number Variations.
Proceedings of the 12th IEEE International Conference on Data Mining, 2012

Prediction of novel systems components in cell cycle regulation in malaria parasite by subnetwork alignments.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

Signed network propagation for detecting differential gene expressions and DNA copy number variations.
Proceedings of the ACM International Conference on Bioinformatics, 2012

Approximate subspace pattern mining for mapping copy-number variations.
Proceedings of the ACM International Conference on Bioinformatics, 2012

2011
Inferring Disease and Gene Set Associations with Rank Coherence in Networks
CoRR, 2011

Inferring disease and gene set associations with rank coherence in networks.
Bioinformatics, 2011

2010
Integrative classification and analysis of multiple arrayCGH datasets with probe alignment.
Bioinformatics, 2010

A Heterogeneous Label Propagation Algorithm for Disease Gene Discovery.
Proceedings of the SIAM International Conference on Data Mining, 2010

Subspace Differential Coexpression Analysis: Problem Definition and a General Approach.
Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010

Launching: university partnership for health informatics.
Proceedings of the ACM International Health Informatics Symposium, 2010

Network propagation models for gene selection.
Proceedings of the 2010 IEEE International Workshop on Genomic Signal Processing and Statistics, 2010

Integrative Biomarker Discovery for Breast Cancer Metastasis from Gene Expression and Protein Interaction Data Using Error-tolerant Pattern Mining.
Proceedings of the ISCA 2nd International Conference on Bioinformatics and Computational Biology, 2010

2009
A hypergraph-based learning algorithm for classifying gene expression and arrayCGH data with prior knowledge.
Bioinformatics, 2009

Learning Random-Walk Kernels for Protein Remote Homology Identification and Motif Discovery.
Proceedings of the SIAM International Conference on Data Mining, 2009

A hypergraph-based learning algorithm for classifying arraycgh data with spatial prior.
Proceedings of the 2009 IEEE International Workshop on Genomic Signal Processing and Statistics, 2009

Partial profile alignment kernels for protein classification.
Proceedings of the 2009 IEEE International Workshop on Genomic Signal Processing and Statistics, 2009

2008
Robust and efficient identification of biomarkers by classifying features on graphs.
Bioinformatics, 2008

Learning on Weighted Hypergraphs to Integrate Protein Interactions and Gene Expressions for Cancer Outcome Prediction.
Proceedings of the 8th IEEE International Conference on Data Mining (ICDM 2008), 2008

2007
SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition.
BMC Bioinformatics, 2007

2006
Protein Ranking by Semi-Supervised Network Propagation.
BMC Bioinformatics, 2006

2005
Motif-based protein ranking by network propagation.
Bioinformatics, 2005

2004
Fast String Kernels using Inexact Matching for Protein Sequences.
J. Mach. Learn. Res., 2004

Protein backbone angle prediction with machine learning approaches.
Bioinformatics, 2004

Profile-Based String Kernels for Remote Homology Detection and Motif Extraction.
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

2003
Fast Kernels for Inexact String Matching.
Proceedings of the Computational Learning Theory and Kernel Machines, 2003


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