Ruibin Xi

According to our database, Ruibin Xi authored at least 18 papers between 2009 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Benchmarking algorithms for spatially variable gene identification in spatial transcriptomics.

Xuanwei Chen, Qinghua Ran, Junjie Tang, Zihao Chen, Siyuan Huang, Xingjie Shi, Ruibin Xi

Bioinform., 2025

TAGET: a toolkit for analyzing full-length transcripts from single molecular sequencing.

Yuchao Xia, Susheng Miao, Ruibin Xi

Briefings Bioinform., 2025

A Generic Family of Graphical Models: Diversity, Efficiency, and Heterogeneity.

Yufei Huang, Changhu Wang, Junjie Tang, Weichi Wu, Ruibin Xi

Proceedings of the Forty-second International Conference on Machine Learning, 2025

2024

Codes for "Directly selecting cell-type marker genes for single-cell clustering analyses".

Zihao Chen, Changhu Wang, Siyuan Huang, Yang Shi, Ruibin Xi

Dataset, May, 2024

Codes for "Directly selecting cell-type marker genes for single-cell clustering analyses".

Zihao Chen, Changhu Wang, Siyuan Huang, Yang Shi, Ruibin Xi

Dataset, May, 2024

Single-cell gene regulatory network analysis for mixed cell populations.

Junjie Tang, Changhu Wang, Feiyi Xiao, Ruibin Xi

Quant. Biol., 2024

2023

Festem: Directly selecting differentially expressed genes for single-cell clustering analyses.

Zihao Chen, Changhu Wang, Siyuan Huang, Yang Shi, Ruibin Xi

Dataset, July, 2023

2022

Estimating graphical models for count data with applications to single-cell gene network.

Feiyi Xiao, Junjie Tang, Huaying Fang, Ruibin Xi

Proceedings of the Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, 2022

2020

CNV-BAC: Copy number Variation Detection in Bacterial Circular Genome.

Linjie Wu, Han Wang, Yuchao Xia, Ruibin Xi

Bioinform., 2020

scRMD: imputation for single cell RNA-seq data via robust matrix decomposition.

Chong Chen, Changjing Wu, Linjie Wu, Xiaochen Wang, Minghua Deng, Ruibin Xi

Bioinform., 2020

2019

DTMBIO 2019: The Thirteenth International Workshop on Data and Text Mining in Biomedical Informatics.

Hyojung Paik, Ruibin Xi, Doheon Lee

Proceedings of the 28th ACM International Conference on Information and Knowledge Management, 2019

2017

Pysim-sv: a package for simulating structural variation data with GC-biases.

Yuchao Xia, Yun Liu, Minghua Deng, Ruibin Xi

BMC Bioinform., 2017

SVmine improves structural variation detection by integrative mining of predictions from multiple algorithms.

Yuchao Xia, Yun Liu, Minghua Deng, Ruibin Xi

Bioinform., 2017

2016

Evaluation of somatic copy number estimation tools for whole-exome sequencing data.

Jae-Yong Nam, Nayoung K. D. Kim, Sang Cheol Kim, Je-Gun Joung, Ruibin Xi, Semin Lee, Peter J. Park, Woong-Yang Park

Briefings Bioinform., 2016

2011

Compression and aggregation of Bayesian estimates for data intensive computing.

Ruibin Xi, Nan Lin, Yixin Chen, Youngjin Kim

Knowl. Inf. Syst., 2011

2010

Fast surrogates of U-statistics.

N. Lin, Ruibin Xi

Comput. Stat. Data Anal., 2010

rSW-seq: Algorithm for detection of copy number alterations in deep sequencing data.

Tae-Min Kim, Lovelace J. Luquette, Ruibin Xi, Peter J. Park

BMC Bioinform., 2010

2009

Compression and Aggregation for Logistic Regression Analysis in Data Cubes.

Ruibin Xi, Nan Lin, Yixin Chen

IEEE Trans. Knowl. Data Eng., 2009