Sándor Pongor

According to our database, Sándor Pongor authored at least 45 papers between 1993 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2022

Microsimulation based quantitative analysis of COVID-19 management strategies.

István Z. Reguly, Dávid Csercsik, János Juhász, Kálmán Tornai, Zsófia Bujtár, Gergely Horváth, Bence Keömley-Horváth, Tamás Kós, György Cserey, Kristóf Iván, Sándor Pongor, Gábor Szederkényi, Gergely Röst, Attila Csikász-Nagy

PLoS Comput. Biol., 2022

2021

COVIDOUTCOME - estimating COVID severity based on mutation signatures in the SARS-CoV-2 genome.

Ádám Nagy, Balázs Ligeti, János Szebeni, Sándor Pongor, Balazs Györffy

Database J. Biol. Databases Curation, 2021

2019

TPMCalculator: one-step software to quantify mRNA abundance of genomic features.

Roberto Vera Alvarez, Lorinc Sándor Pongor, Leonardo Mariño-Ramírez, David Landsman

Bioinform., 2019

A snapshot of 3649 Web-based services published between 1994 and 2017 shows a decrease in availability after 2 years.

Ágnes Osz, Lorinc Sándor Pongor, Danuta Szirmai, Balazs Györffy

Briefings Bioinform., 2019

2015

Multi-netclust: an efficient tool for finding connected clusters in multi-parametric networks.

Arnold Kuzniar, Somdutta Dhir, Harm Nijveen, Sándor Pongor, Jack A. M. Leunissen

Bioinform., 2015

2014

PTMTreeSearch: a novel two-stage tree-search algorithm with pruning rules for the identification of post-translational modification of proteins in MS/MS spectra.

Attila Kertész-Farkas, Beáta Reiz, Roberto Vera, Michael P. Myers, Sándor Pongor

Bioinform., 2014

2013

How bioinformatics influences health informatics: usage of biomolecular sequences, expression profiles and automated microscopic image analyses for clinical needs and public health.

Vladimir A. Kuznetsov, Hwee Kuan Lee, Sebastian Maurer-Stroh, Maria Judit Molnár, Sándor Pongor, Birgit Eisenhaber, Frank Eisenhaber

Health Inf. Sci. Syst., 2013

Chemical rule-based filtering of MS/MS spectra.

Beáta Reiz, Attila Kertész-Farkas, Sándor Pongor, Michael P. Myers

Bioinform., 2013

<i>JBioWH</i>: an open-source Java framework for bioinformatics data integration.

Roberto Vera, Yasset Pérez-Riverol, Sonia Pérez, Balázs Ligeti, Attila Kertész-Farkas, Sándor Pongor

Database J. Biol. Databases Curation, 2013

Obituary: In memory of Jack Leunissen.

Jingchu Luo, Harm Nijveen, Teresa K. Attwood, David Phillip Judge, Sándor Pongor, David Landsman, Martin J. Bishop

Briefings Bioinform., 2013

Predicting effective drug combinations via network propagation.

Balázs Ligeti, Roberto Vera, Gergely Lukács, Balazs Györffy, Sándor Pongor

Proceedings of the 2013 IEEE Biomedical Circuits and Systems Conference (BioCAS), Rotterdam, The Netherlands, October 31, 2013

2012

Classifying the Topology of AHL-Driven Quorum Sensing Circuits in Proteobacterial Genomes.

Zsolt Gelencsér, Kumari Sonal Choudhary, Bruna Goncalves Coutinho, Sanjarbek Hudaiberdiev, Borisz Galbáts, Vittorio Venturi, Sándor Pongor

Sensors, 2012

Simulation of communication and cooperation in multispecies bacterial communities with an agent based model.

Dora Bihary, Adam Kerenyi, Zsolt Gelencsér, Sergiu Netotea, Attila Kertész-Farkas, Vittorio Venturi, Sándor Pongor

Scalable Comput. Pract. Exp., 2012

2011

Psychologically Inspired, Rule-Based Outlier Detection in Noisy Data.

Beáta Reiz, Sándor Pongor

Proceedings of the 13th International Symposium on Symbolic and Numeric Algorithms for Scientific Computing, 2011

PTMSearch: A Greedy Tree Traversal Algorithm for Finding Protein Post-Translational Modifications in Tandem Mass Spectra.

Attila Kertész-Farkas, Beáta Reiz, Michael P. Myers, Sándor Pongor

Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2011

2009

ProGMap: an integrated annotation resource for protein orthology.

Arnold Kuzniar, Ke Lin, Ying He, Harm Nijveen, Sándor Pongor, Jack A. M. Leunissen

Nucleic Acids Res., 2009

2008

Tree-Based Algorithms for Protein Classification.

Róbert Busa-Fekete, András Kocsor, Sándor Pongor

Proceedings of the Computational Intelligence in Bioinformatics, 2008

Fast protein fold estimation from NMR-derived distance restraints.

Annamária F. Ángyán, András Perczel, Sándor Pongor, Zoltán Gáspári

Bioinform., 2008

ROC analysis: applications to the classification of biological sequences and 3D structures.

Paolo Sonego, András Kocsor, Sándor Pongor

Briefings Bioinform., 2008

Analysis of Kernel Based Protein Classification Strategies Using Pairwise Sequence Alignment Measures.

Dino Franklin, Somdutta Dhir, Sándor Pongor

Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2008

2007

A Protein Classification Benchmark collection for machine learning.

Paolo Sonego, Mircea Pacurar, Somdutta Dhir, Attila Kertész-Farkas, András Kocsor, Zoltán Gáspári, Jack A. M. Leunissen, Sándor Pongor

Nucleic Acids Res., 2007

Equivalence Learning in Protein Classification.

Attila Kertész-Farkas, András Kocsor, Sándor Pongor

Proceedings of the Machine Learning and Data Mining in Pattern Recognition, 2007

2006

Application of compression-based distance measures to protein sequence classification: a methodological study.

András Kocsor, Attila Kertész-Farkas, László Kaján, Sándor Pongor

Bioinform., 2006

Application of a simple likelihood ratio approximant to protein sequence classification.

László Kaján, Attila Kertész-Farkas, Dino Franklin, Neli Ivanova, András Kocsor, Sándor Pongor

Bioinform., 2006

2005

CX, DPX and PRIDE: WWW servers for the analysis and comparison of protein 3D structures.

Kristian Vlahovicek, Alessandro Pintar, Laavanya Parthasarathi, Oliviero Carugo, Sándor Pongor

Nucleic Acids Res., 2005

The SBASE domain sequence resource, release 12: prediction of protein domain-architecture using support vector machines.

Kristian Vlahovicek, László Kaján, Vilmos Ágoston, Sándor Pongor

Nucleic Acids Res., 2005

Graph-representation of oxidative folding pathways.

Vilmos Ágoston, Masa Cemazar, László Kaján, Sándor Pongor

BMC Bioinform., 2005

Efficient recognition of folds in protein 3D structures by the improved PRIDE algorithm.

Zoltán Gáspári, Kristian Vlahovicek, Sándor Pongor

Bioinform., 2005

2003

DNA analysis servers: plot.it, bend.it, model.it and IS.

Kristian Vlahovicek, László Kaján, Sándor Pongor

Nucleic Acids Res., 2003

The SBASE domain sequence library, release 10: domain architecture prediction.

Kristian Vlahovicek, László Kaján, János Murvai, Zoltán Hegeds, Sándor Pongor

Nucleic Acids Res., 2003

DPX: for the analysis of the protein core.

Alessandro Pintar, Oliviero Carugo, Sándor Pongor

Bioinform., 2003

IS: a web-site for intron statistics.

Endre Barta, László Kaján, Sándor Pongor

Bioinform., 2003

2002

The SBASE protein domain library, release 9.0: an online resource for protein domain identification.

Kristian Vlahovicek, János Murvai, Endre Barta, Sándor Pongor

Nucleic Acids Res., 2002

CX, an algorithm that identifies protruding atoms in proteins.

Alessandro Pintar, Oliviero Carugo, Sándor Pongor

Bioinform., 2002

2001

The SBASE protein domain library, release 8.0: a collection of annotated protein sequence segments.

János Murvai, Kristian Vlahovicek, Endre Barta, Sándor Pongor

Nucleic Acids Res., 2001

2000

The SBASE protein domain library, release 7.0: a collection of annotated protein sequence segments.

János Murvai, Kristian Vlahovicek, Endre Barta, Bruno Cataletto, Sándor Pongor

Nucleic Acids Res., 2000

model.it : building three dimensional DNA models from sequence data.

Kristian Vlahovicek, Sándor Pongor

Bioinform., 2000

A simple probabilistic scoring method for protein domain identification.

János Murvai, Kristian Vlahovicek, Sándor Pongor

Bioinform., 2000

1999

The SBASE protein domain library, release 6.0: a collection of annotated protein sequence segments.

János Murvai, Kristian Vlahovicek, Endre Barta, Csaba Szepesvári, Cristina Acatrinei, Sándor Pongor

Nucleic Acids Res., 1999

The domain-server: direct prediction of protein domain-homologies from BLAST search.

János Murvai, Kristian Vlahovicek, Endre Barta, Subbiah Parthasarathy, Hedvig Hegyi, Friedhelm Pfeiffer, Sándor Pongor

Bioinform., 1999

1997

The SBASE protein domain library, release 5.0: a collection of annotated protein sequence segments.

Péter Fábián, János Murvai, Zsolt Hátsági, Kristian Vlahovicek, Hedvig Hegyi, Sándor Pongor

Nucleic Acids Res., 1997

1996

The SBASE protein domain library, Release 4.0: a collection of annotated protein sequence segments.

János Murvai, Andrei E. Gabrielian, Péter Fábián, Zsolt Hátsági, Kirill Degtyarenko, Hedvig Hegyi, Sándor Pongor

Nucleic Acids Res., 1996

1994

Protein Motifs: Towards a Unified View on Databases.

Zsolt Hátsági, Vesna Skerl, Sándor Pongor

Proceedings of the 27th Annual Hawaii International Conference on System Sciences (HICSS-27), 1994

1993

The SBASE protein domain library, release 2.0: a collection of annotated protein sequence segments.

Sándor Pongor, Vesna Skerl, Miklós Cserzo, Zsolt Hátsági, György J. Simon, Valeria Bevilacqua

Nucleic Acids Res., 1993

Predicting potential domain homologies from FASTA search results.

Hedvig Hegyi, Sándor Pongor

Comput. Appl. Biosci., 1993