Sarvnaz Karimi

According to our database1, Sarvnaz Karimi authored at least 63 papers between 2006 and 2020.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Online presence:

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Bibliography

2020
Clinical trial search: Using biomedical language understanding models for re-ranking.
J. Biomed. Informatics, 2020

Matching patients to clinical trials using semantically enriched document representation.
J. Biomed. Informatics, 2020

Beyond mean rating: Probabilistic aggregation of star ratings based on helpfulness.
J. Assoc. Inf. Sci. Technol., 2020

Survey of Text-based Epidemic Intelligence: A Computational Linguistics Perspective.
ACM Comput. Surv., 2020

Searching Scientific Literature for Answers on COVID-19 Questions.
CoRR, 2020

A2A: a platform for research in biomedical literature search.
BMC Bioinform., 2020

Cost-effective Selection of Pretraining Data: A Case Study of Pretraining BERT on Social Media.
Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing: Findings, 2020

An Effective Transition-based Model for Discontinuous NER.
Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics, 2020

2019
Survey of Text-based Epidemic Intelligence: A Computational Linguistic Perspective.
CoRR, 2019

CSIRO at 2019 TREC Precision Medicine Track.
Proceedings of the Twenty-Eighth Text REtrieval Conference, 2019

An Experimentation Platform for Precision Medicine.
Proceedings of the 42nd International ACM SIGIR Conference on Research and Development in Information Retrieval, 2019

Using Similarity Measures to Select Pretraining Data for NER.
Proceedings of the 2019 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, 2019

From Chest X-Rays to Radiology Reports: A Multimodal Machine Learning Approach.
Proceedings of the 2019 Digital Image Computing: Techniques and Applications, 2019

Biomedical Concept Detection in Medical Images: MQ-CSIRO at 2019 ImageCLEFmed Caption Task.
Proceedings of the Working Notes of CLEF 2019, 2019

ANU-CSIRO at MEDIQA 2019: Question Answering Using Deep Contextual Knowledge.
Proceedings of the 18th BioNLP Workshop and Shared Task, 2019

A Comparison of Word-based and Context-based Representations for Classification Problems in Health Informatics.
Proceedings of the 18th BioNLP Workshop and Shared Task, 2019

NNE: A Dataset for Nested Named Entity Recognition in English Newswire.
Proceedings of the 57th Conference of the Association for Computational Linguistics, 2019

Figurative Usage Detection of Symptom Words to Improve Personal Health Mention Detection.
Proceedings of the 57th Conference of the Association for Computational Linguistics, 2019

Red-faced ROUGE: Examining the Suitability of ROUGE for Opinion Summary Evaluation.
Proceedings of the The 17th Annual Workshop of the Australasian Language Technology Association, 2019

Investigating the Effect of Lexical Segmentation in Transformer-based Models on Medical Datasets.
Proceedings of the The 17th Annual Workshop of the Australasian Language Technology Association, 2019

Does Multi-Task Learning Always Help?: An Evaluation on Health Informatics.
Proceedings of the The 17th Annual Workshop of the Australasian Language Technology Association, 2019

2018
Transferability of artificial neural networks for clinical document classification across hospitals: A case study on abnormality detection from radiology reports.
J. Biomed. Informatics, 2018

Benchmarking Clinical Decision Support Search.
CoRR, 2018

A2A: Benchmark Your Clinical Decision Support Search.
Proceedings of the 41st International ACM SIGIR Conference on Research & Development in Information Retrieval, 2018

Modality Classification and Concept Detection in Medical Images Using Deep Transfer Learning.
Proceedings of the 2018 International Conference on Image and Vision Computing New Zealand, 2018

Computer-Assisted Diagnostic Coding: Effectiveness of an NLP-based approach using SNOMED CT to ICD-10 mappings.
Proceedings of the AMIA 2018, 2018

2017
CSIRO at 2017 TREC Precision Medicine Track.
Proceedings of The Twenty-Sixth Text REtrieval Conference, 2017

Automatic Diagnosis Coding of Radiology Reports: A Comparison of Deep Learning and Conventional Classification Methods.
Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017

Medication and Adverse Event Extraction from Noisy Text.
Proceedings of the Australasian Language Technology Association Workshop, 2017

2016
CSIRO at TREC Clinical Decision Support Track.
Proceedings of The Twenty-Fifth Text REtrieval Conference, 2016

Concept Identification and Normalisation for Adverse Drug Event Discovery in Medical Forums.
Proceedings of the First International Workshop on Biomedical Data Integration and Discovery (BMDID 2016) co-located with The 15th International Semantic Web Conference (ISWC 2016), 2016

Parallel Duplicate Detection in Adverse Drug Reaction Databases with Spark.
Proceedings of the 19th International Conference on Extending Database Technology, 2016

Evaluation of Retrieval Algorithms for Expertise Search.
Proceedings of the 21st Australasian Document Computing Symposium, 2016

2015
Automatic classification of diseases from free-text death certificates for real-time surveillance.
BMC Medical Informatics Decis. Mak., 2015

Cadec: A corpus of adverse drug event annotations.
J. Biomed. Informatics, 2015

Text and Data Mining Techniques in Adverse Drug Reaction Detection.
ACM Comput. Surv., 2015

Concept Extraction to Identify Adverse Drug Reactions in Medical Forums: A Comparison of Algorithms.
CoRR, 2015

Evaluation Methods for Statistically Dependent Text.
Comput. Linguistics, 2015

Using Social Media to Enhance Emergency Situation Awareness: Extended Abstract.
Proceedings of the Twenty-Fourth International Joint Conference on Artificial Intelligence, 2015

CADEminer: A System for Mining Consumer Reports on Adverse Drug Side Effects.
Proceedings of the Eighth Workshop on Exploiting Semantic Annotations in Information Retrieval, 2015

2014
Differences between social media and regulatory databases in adverse drug reaction discovery.
Proceedings of the SoMeRA'14, 2014

Evaluation of text-processing algorithms for adverse drug event extraction from social media.
Proceedings of the SoMeRA'14, 2014

Pinpointing Locational Focus in Microblogs.
Proceedings of the 2014 Australasian Document Computing Symposium, 2014

A Study of Querying Behaviour of Expert and Non-expert Users of Biomedical Search Systems.
Proceedings of the 2014 Australasian Document Computing Symposium, 2014

Overview of the 2014 ALTA Shared Task: Identifying Expressions of Locations in Tweets.
Proceedings of the Australasian Language Technology Association Workshop, 2014

2013
Location extraction from disaster-related microblogs.
Proceedings of the 22nd International World Wide Web Conference, 2013

Classifying microblogs for disasters.
Proceedings of the Australasian Document Computing Symposium, 2013

2012
Quantifying the impact of concept recognition on biomedical information retrieval.
Inf. Process. Manag., 2012

Searching and Filtering Tweets: CSIRO at the TREC 2012 Microblog Track.
Proceedings of The Twenty-First Text REtrieval Conference, 2012

ESA: emergency situation awareness via microbloggers.
Proceedings of the 21st ACM International Conference on Information and Knowledge Management, 2012

2011
Machine transliteration survey.
ACM Comput. Surv., 2011

Search for Medical Records: NICTA at TREC 2011 Medical Track.
Proceedings of The Twentieth Text REtrieval Conference, 2011

Domain expert topic familiarity and search behavior.
Proceedings of the Proceeding of the 34th International ACM SIGIR Conference on Research and Development in Information Retrieval, 2011

Diverse retrieval via greedy optimization of expected 1-call@k in a latent subtopic relevance model.
Proceedings of the 20th ACM Conference on Information and Knowledge Management, 2011

2010
Visualizing search results and document collections using topic maps.
J. Web Semant., 2010

Boolean versus ranked querying for biomedical systematic reviews.
BMC Medical Informatics Decis. Mak., 2010

Evaluating topic models for digital libraries.
Proceedings of the 2010 Joint International Conference on Digital Libraries, 2010

Best Topic Word Selection for Topic Labelling.
Proceedings of the COLING 2010, 2010

2009
The challenge of high recall in biomedical systematic search.
Proceedings of the Proceeding of the 3rd International Workshop on Data and Text Mining in Bioinformatics, 2009

Using Topic Models to Interpret MEDLINE's Medical Subject Headings.
Proceedings of the AI 2009: Advances in Artificial Intelligence, 2009

2007
Corpus Effects on the Evaluation of Automated Transliteration Systems.
Proceedings of the ACL 2007, 2007

Collapsed Consonant and Vowel Models: New Approaches for English-Persian Transliteration and Back-Transliteration.
Proceedings of the ACL 2007, 2007

2006
English to Persian Transliteration.
Proceedings of the String Processing and Information Retrieval, 2006


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