Jordi Rambla De Argila

According to our database, Jordi Rambla De Argila authored at least 17 papers between 2016 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2025

AskBeacon - performing genomic data exchange and analytics with natural language.

Anuradha Wickramarachchi, Shakila Mahjabin Tonni, Sonali Majumdar, Sarvnaz Karimi, Sulev Kõks, Brendan Hosking, Jordi Rambla, Natalie A. Twine, Yatish Jain, Denis C. Bauer

Bioinform., 2025

DATOS.CAT: Improving the level of the interoperability of GCAT in line with the FAIR principles with OntoBridge, dsOMOP and OMOP Beacon.

Aikaterini Lymperidou, David Sarrat-González, Ramon Mateo-Navarro, Guillem Bracons Cucó, Aurora Moreno-Racero, Jordi Rambla De Argila, Liina Lagirnaja, Carles Hernandez-Ferrer, Salvador Capella-Gutiérrez, Santiago Andrés Frid, Juan R. González, Rafael de Cid

Proceedings of the 16th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2025), 2025

From Clinical Data to Discovery: integration of Beacon v2 with OMOP-CDM.

Sergi Aguiló-Castillo, Alberto Labarga, Miguel Angel Mayer, Juan Manuel Ramírez-Anguita, Oriol López-Doriga Sagales, Aurora Moreno-Racero, Liina Nagirnaja, Dmitry Repchevski, Salvador Capella-Gutiérrez, Jordi Rambla

Proceedings of the 16th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2025), 2025

2024

Twelve quick tips for deploying a Beacon.

Lauren A. Fromont, Mauricio Moldes, Michael Baudis, Anthony J. Brookes, Arcadi Navarro, Jordi Rambla

PLoS Comput. Biol., 2024

2023

RNAget: an API to securely retrieve RNA quantifications.

Sean Upchurch, Emilio Palumbo, Jeremy Adams, David Bujold, Guillaume Bourque, Jared Nedzel, Keenan Graham, Meenakshi S. Kagda, Pedro Assis, Benjamin C. Hitz, Emilio Righi, Roderic Guigó, Barbara J. Wold, Alvis Brazma, Julia Burchard, Joe Capka, Michael Cherry, Laura Clarke, Brian Craft, Manolis Dermitzakis, Mark Diekhans, John Dursi, Michael Sean Fitzsimons, Zac Flaming, Romina Garrido, Alfred Gil, Paul Godden, Matt Green, Mitch Guttman, Brian Haas, Max Haeussler, Bo Li, Sten Linnarsson, Adam Lipski, David Liu, Simonne Longerich, David R. Lougheed, Jonathan Manning, John C. Marioni, Christopher Meyer, Stephen B. Montgomery, Alyssa Morrow, Alfonso Muñoz-Pomer Fuentes, Jared L. Nedzel, David Nguyen, Kevin Osborn, Francis Ouellette, Irene Papatheodorou, Dmitri D. Pervouchine, Arun K. Ramani, Jordi Rambla, Bashir Sadjad, David Steinberg, Jeremiah Talkar, Timothy Tickle, Kathy Tzeng, Saman Vaisipour, Sean Watford, Barbara Wold, Zhenyu Zhang, Jing Zhu

Bioinform., April, 2023

Consent Codes: Maintaining Consent in an Ever-expanding Open Science Ecosystem.

Stephanie O. M. Dyke, Kathleen Connor, Victoria Nembaware, Nchangwi S. Munung, Kathy Reinold, Giselle Kerry, Mamana Mbiyavanga, Lyndon Zass, Mauricio Moldes, Samir Das, John Mike Davis, Jordi Rambla De Argila, J. Dylan Spalding, Alan C. Evans, Nicola J. Mulder, Jason Karamchandani

Neuroinformatics, January, 2023

2022

The European Genome-phenome Archive in 2021.

Mallory Ann Freeberg, Lauren A. Fromont, Teresa D'altri, Anna Foix Romero, Jorge Izquierdo Ciges, Aina Jene, Giselle Kerry, Mauricio Moldes, Roberto Ariosa, Silvia Bahena, Daniel Barrowdale, Marcos Casado Barbero, Dietmar Fernández-Orth, Carles Garcia-Linares, Emilio Garcia-Rios, Frédéric Haziza, Bela Juhasz, Oscar Martinez Llobet, Gemma Milla, Anand Mohan, Manuel Rueda, Aravind Sankar, Dona Shaju, Ashutosh Shimpi, Babita Singh, Coline Thomas, Sabela de la Torre, Umuthan Uyan, Claudia Vasallo, Paul Flicek, Roderic Guigó, Arcadi Navarro, Helen E. Parkinson, Thomas M. Keane, Jordi Rambla

Nucleic Acids Res., 2022

Beacon v2 Reference Implementation: a toolkit to enable federated sharing of genomic and phenotypic data.

Manuel Rueda, Roberto Ariosa, Mauricio Moldes, Jordi Rambla

Bioinform., 2022

A quality control portal for sequencing data deposited at the European genome-phenome archive.

Dietmar Fernández-Orth, Manuel Rueda, Babita Singh, Mauricio Moldes, Aina Jene, Marta Ferri, Claudia Vasallo, Lauren A. Fromont, Arcadi Navarro, Jordi Rambla

Briefings Bioinform., 2022

2020

Genome-phenome explorer (GePhEx): a tool for the visualization and interpretation of phenotypic relationships supported by genetic evidence.

Xavier Farré, Nino Spataro, Frédéric Haziza, Jordi Rambla, Arcadi Navarro

Bioinform., 2020

The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences.

Rachel Drysdale, Charles E. Cook, Robert Petryszak, Vivienne Baillie Gerritsen, Mary Barlow, Elisabeth Gasteiger, Franziska Gruhl, Jürgen Haas, Jerry Lanfear, Rodrigo Lopez, Nicole Redaschi, Heinz Stockinger, Daniel Teixeira, Aravind Venkatesan, Alex Bateman, Alan J. Bridge, Guy Cochrane, Robert D. Finn, Frank Oliver Glöckner, Marc Hanauer, Thomas M. Keane, Andrew Leach, Luana Licata, Per Oksvold, Sandra E. Orchard, Christine A. Orengo, Helen E. Parkinson, Bengt Persson, Pablo Porras, Jordi Rambla, Ana Rath, Charlotte Rodwell, Ugis Sarkans, Dietmar Schomburg, Ian Sillitoe, J. Dylan Spalding, Mathias Uhlén, Sameer Velankar, Juan Antonio Vizcaíno, Kalle von Feilitzen, Christian von Mering, Andrew D. Yates, Niklas Blomberg, Christine Durinx, Johanna R. McEntyre

Bioinform., 2020

2019

iASiS: Towards Heterogeneous Big Data Analysis for Personalized Medicine.

Anastasia Krithara, Fotis Aisopos, Vassiliki Rentoumi, Anastasios Nentidis, Konstantinos Bougiatiotis, Maria-Esther Vidal, Ernestina Menasalvas, Alejandro Rodríguez González, Eleftherios Samaras, Peter Garrard, Maria Torrente, Mariano Provencio Pulla, Nikos Dimakopoulos, Rui Mauricio, Jordi Rambla De Argila, Gian Gaetano Tartaglia, George Paliouras

Proceedings of the 32nd IEEE International Symposium on Computer-Based Medical Systems, 2019

European Genome-Phenome Archive (EGA) - Granular Solutions for the Next 10 Years.

Dietmar Fernández-Orth, Audald Lloret-Villas, Jordi Rambla De Argila

Proceedings of the 32nd IEEE International Symposium on Computer-Based Medical Systems, 2019

2018

FaST-LMM for Two-Way Epistasis Tests on High-Performance Clusters.

Héctor Martínez, Sergio Barrachina, Maribel Castillo, Enrique S. Quintana-Ortí, Jordi Rambla De Argila, Xavier Farré, Arcadi Navarro

J. Comput. Biol., 2018

2017

Systematically linking tranSMART, Galaxy and EGA for reusing human translational research data.

Chao Zhang, Jochem Bijlard, Christine Staiger, Serena A. Scollen, David van Enckevort, Youri Hoogstrate, Alexander Senf, Saskia D. Hiltemann, Susanna Repo, Wibo Pipping, Mariska Bierkens, Stefan Payralbe, Bas Stringer, Jaap Heringa, Andrew Stubbs, Luiz Olavo Bonino da Silva Santos, Jeroen Beliën, Ward Weistra, Rita Azevedo, Kees van Bochove, Gerrit Meijer, Jan-Willem Boiten, Jordi Rambla, Remond J. A. Fijneman, J. Dylan Spalding, Sanne Abeln

F1000Research, 2017

Accelerating FaST-LMM for Epistasis Tests.

Héctor Martínez, Sergio Barrachina, Maribel Castillo, Enrique S. Quintana-Ortí, Jordi Rambla De Argila, Xavier Farré, Arcadi Navarro

Proceedings of the Algorithms and Architectures for Parallel Processing, 2017

2016

Integration of EGA secure data access into Galaxy.

Youri Hoogstrate, Chao Zhang, Alexander Senf, Jochem Bijlard, Saskia D. Hiltemann, David van Enckevort, Susanna Repo, Jaap Heringa, Guido Jenster, Remond J. A. Fijneman, Jan-Willem Boiten, Gerrit A. Meijer, Andrew Stubbs, Jordi Rambla, J. Dylan Spalding, Sanne Abeln

F1000Research, 2016