Sherine Awad

According to our database, Sherine Awad authored at least 5 papers between 2012 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Porting the Variant Calling Pipeline for NGS data in cloud-HPC environment.

Alberto Mulone, Sherine Awad, Davide Chiarugi, Marco Aldinucci

Proceedings of the 47th IEEE Annual Computers, Software, and Applications Conference, 2023

2015

Crossing the streams: a framework for streaming analysis of short DNA sequencing reads.

Qingpeng Zhang, Sherine Awad, C. Titus Brown

PeerJ Prepr., 2015

The khmer software package: enabling efficient nucleotide sequence analysis.

Michael R. Crusoe, Hussien F. Alameldin, Sherine Awad, Elmar Boucher, Adam Caldwell, Reed Cartwright, Amanda Charbonneau, Bede Constantinides, Greg Edvenson, Scott Fay, Jacob Fenton, Thomas Fenzl, Jordan A. Fish, Leonor Garcia-Gutierrez, Phillip Garland, Jonathan Gluck, Iván González, Sarah Guermond, Jiarong Guo, Aditi Gupta, Joshua R. Herr, Adina Howe, Alex Hyer, Andreas Härpfer, Luiz Irber, Rhys Kidd, David Lin, Justin Lippi, Tamer Mansour, Pamela McA'Nulty, Eric McDonald, Jessica Mizzi, Kevin D. Murray, Joshua R. Nahum, Kaben Nanlohy, Alexander Johan Nederbragt, Humberto Ortiz-Zuazaga, Jeramia Ory, Jason Pell, Charles Pepe-Ranney, Zachary N. Russ, Erich M. Schwarz, Camille Scott, Josiah D. Seaman, Scott Sievert, Jared Simpson, Connor Skennerton, James Spencer, Ramakrishnan Srinivasan, Daniel S. Standage, James A. Stapleton, Susan R. Steinman, Joe Stein, Benjamin Taylor, Will Trimble, Heather Wiencko, Michael Wright, Brian Wyss, Qingpeng Zhang, en zyme, C. Titus Brown

F1000Research, 2015

2014

Inferring transcription factor collaborations in gene regulatory networks.

Sherine Awad, Jin Chen

BMC Syst. Biol., 2014

2012

Inferring the Regulatory Interaction Models of transcription Factors in transcriptional Regulatory Networks.

Sherine Awad, Nicholas Panchy, See-Kiong Ng, Jin Chen

J. Bioinform. Comput. Biol., 2012