Shinji Nakaoka

According to our database, Shinji Nakaoka authored at least 7 papers between 2019 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2026

A prototype coupled modeling approach for predicting harmful algal blooms: A case study in Chile.

Ishara Uhanie Perera, So Fujiyoshi, Daiki Kumakura, Carolina Medel, Kyoko Yarimizu, Osvaldo Artal, Pablo Reche, Oscar Espinoza-González, Leonardo Guzman, Felipe Tucca, Alexander Jaramillo-Torres, Jacquelinne J. Acuña, Milko A. Jorquera, Shinji Nakaoka, Satoshi Nagai, Fumito Maruyama

Ecol. Informatics, 2026

2025

Prediction of cccDNA dynamics in hepatitis B patients by a combination of serum surrogate markers.

Kwang Su Kim, Masashi Iwamoto, Kosaku Kitagawa, Hyeongki Park, Sanae Hayashi, Senko Tsukuda, Takeshi Matsui, Masanori Atsukawa, Kentaro Matsuura, Natthaya Chuaypen, Pisit Tangkijvanich, Lena Allweiss, Takara Nishiyama, Naotoshi Nakamura, Yasuhisa Fujita, Eiryo Kawakami, Shinji Nakaoka, Masamichi Muramatsu, Kazuyuki Aihara, Takaji Wakita, Alan S. Perelson, Maura Dandri, Koichi Watashi, Shingo Iwami, Yasuhito Tanaka

PLoS Comput. Biol., 2025

2024

Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation to analyze extracellular viral markers.

Kosaku Kitagawa, Kwang Su Kim, Masashi Iwamoto, Sanae Hayashi, Hyeongki Park, Takara Nishiyama, Naotoshi Nakamura, Yasuhisa Fujita, Shinji Nakaoka, Kazuyuki Aihara, Alan S. Perelson, Lena Allweiss, Maura Dandri, Koichi Watashi, Yasuhito Tanaka, Shingo Iwami

PLoS Comput. Biol., 2024

2022

Antithetic effect of interferon-α on cell-free and cell-to-cell HIV-1 infection.

Ryuichi Kumata, Shoya Iwanami, Katrina B. Mar, Yusuke Kakizoe, Naoko Misawa, Shinji Nakaoka, Yoshio Koyanagi, Alan S. Perelson, John W. Schoggins, Shingo Iwami, Kei Sato

PLoS Comput. Biol., 2022

Evolving neural networks through bio-inspired parent selection in dynamic environments.

Junya Sunagawa, Ryo Yamaguchi, Shinji Nakaoka

Biosyst., 2022

2020

Computation harvesting in road traffic dynamics.

Hiroyasu Ando, T. Okamoto, Hanten Chang, T. Noguchi, Shinji Nakaoka

CoRR, 2020

2019

Effect of shapes of activation functions on predictability in the echo state network.

Hanten Chang, Shinji Nakaoka, Hiroyasu Ando

CoRR, 2019