Shugo Nakamura

According to our database, Shugo Nakamura authored at least 17 papers between 1998 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Understanding Neural ODE prediction decision using SHAP.

Phuong Dinh, Deddy Jobson, Takashi Sano, Hirotada Honda, Shugo Nakamura

Proceedings of the Northern Lights Deep Learning Conference, 2024

2023

An ODE-based neural network with Bayesian optimization.

Hirotada Honda, Takashi Sano, Shugo Nakamura, Mitsuaki Ueno, Hiroki Hanazawa, Nguyen Manh Duc Tuan

JSIAM Lett., 2023

From Coupled Oscillators to Graph Neural Networks: Reducing Over-smoothing via a Kuramoto Model-based Approach.

Tuan Nguyen, Tan M. Nguyen, Hirotada Honda, Takashi Sano, Vinh Nguyen, Shugo Nakamura

CoRR, 2023

2017

Development of a sugar-binding residue prediction system from protein sequences using support vector machine.

Masaki Banno, Yusuke Komiyama, Cao Wei, Yuya Oku, Kokoro Ueki, Kazuya Sumikoshi, Shugo Nakamura, Tohru Terada, Kentaro Shimizu

Comput. Biol. Chem., 2017

2015

Tyrosine Kinase Ligand-Receptor Pair Prediction by Using Support Vector Machine.

Masayuki Yarimizu, Cao Wei, Yusuke Komiyama, Kokoro Ueki, Shugo Nakamura, Kazuya Sumikoshi, Tohru Terada, Kentaro Shimizu

Adv. Bioinformatics, 2015

2012

Prospects for Tertiary Structure Prediction of RNA Based on Secondary Structure Information.

Satoshi Yamasaki, Shugo Nakamura, Kazuhiko Fukui

J. Chem. Inf. Model., 2012

2011

Industry Track: An Image Classification and Browsing System for Farm Inspection.

Masaki Ishihara, Shugo Nakamura, Takayuki Baba, Masahiko Sugimura, Susumu Endo, Yusuke Uehara, Daiki Masumoto

Proceedings of the 2011 IEEE International Symposium on Multimedia, 2011

2010

Prediction of Carbohydrate-Binding Proteins from Sequences Using Support Vector Machines.

Seizi Someya, Masanori Kakuta, Mizuki Morita, Kazuya Sumikoshi, Cao Wei, Ge Zhenyi, Osamu Hirose, Shugo Nakamura, Tohru Terada, Kentaro Shimizu

Adv. Bioinformatics, 2010

2009

Computational Protocol for Screening GPI-anchored Proteins.

Cao Wei, Kazuya Sumikoshi, Tohru Terada, Shugo Nakamura, Katsuhiko Kitamoto, Kentaro Shimizu

Proceedings of the Bioinformatics and Computational Biology, 2009

2006

Insight of the Signal Motif of GPI-(like)-anchored Proteins by using SVM.

Cao Wei, Kazuya Sumikoshi, Tohru Terada, Shugo Nakamura, Kentaro Shimizu

Proceedings of the 2006 International Conference on Bioinformatics & Computational Biology, 2006

2004

Distributed Shared Arrays: Portable Shared-Memory Programming Interface for Multiple Computer Systems.

Akira Nomoto, Yasuo Watanabe, Wataru Kaneko, Shugo Nakamura, Kentaro Shimizu

Clust. Comput., 2004

Programming Environment Based on Distributed Shared Arrays for High-Performance Scientific Computing.

Akira Nomoto, Wataru Kaneko, Tohru Terada, Shugo Nakamura, Kentaro Shimizu

Proceedings of the 2004 Symposium on Applications and the Internet Workshops (SAINT 2004 Workshops), 2004

2003

Design and Implementation of a Parallel Programming Environment Based on Distributed Shared Arrays.

Wataru Kaneko, Akira Nomoto, Yasuo Watanabe, Shugo Nakamura, Kentaro Shimizu

Proceedings of the High Performance Computing, 5th International Symposium, 2003

2002

New method for parallel computation of Hessian matrix of conformational energy function in internal coordinates.

Shugo Nakamura, Daisuke Kyono, Mitsunori Ikeguchi, Kentaro Shimizu

J. Comput. Chem., 2002

Automatic Improvement of Scheduling Policies in Parsley Parallel Programming Environment.

Masakazu Sekijima, Shinya Takasaki, Shugo Nakamura, Kentaro Shimizu

Proceedings of the International Conference on Parallel and Distributed Computing Systems, 2002

1999

Prediction of protein structure classes and secondary structures by means of hidden Markov models.

Hiroshi Yoshikawa, Mitsunori Ikeguchi, Shugo Nakamura, Kentaro Shimizu, Junta Doi

Syst. Comput. Jpn., 1999

1998

Parallel algorithm for efficient calculation of second derivatives of conformational energy function in internal coordinates.

Shugo Nakamura, Mitsunori Ikeguchi, Kentaro Shimizu

J. Comput. Chem., 1998