Stefan Verhoeven

According to our database, Stefan Verhoeven authored at least 12 papers between 2005 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2021

Spec2Vec: Improved mass spectral similarity scoring through learning of structural relationships.

Florian Huber, Lars Ridder, Stefan Verhoeven, Jurriaan H. Spaaks, Faruk Diblen, Simon Rogers, Justin J. J. van der Hooft

PLoS Comput. Biol., 2021

2020

matchms - processing and similarity evaluation of mass spectrometry data.

Florian Huber, Stefan Verhoeven, Christiaan Meijer, Hanno Spreeuw, Efraín Castilla, Cunliang Geng, Justin J. J. van der Hooft, Simon Rogers, Adam Belloum, Faruk Diblen, Jurriaan H. Spaaks

J. Open Source Softw., 2020

2018

Painting the Picture of Software Impact with the Research Software Directory.

Jurriaan H. Spaaks, Tom Klaver, Stefan Verhoeven, Jason Maassen, Tom Bakker, Atze van der Ploeg, Ben van Werkhoven, Willem Robert van Hage, Rob V. van Nieuwpoort

Proceedings of the 14th IEEE International Conference on e-Science, 2018

A Portable and Scalable Workflow for Detecting Structural Variants in Whole-Genome Sequencing Data.

Arnold Kuzniar, Jason Maassen, Stefan Verhoeven, Luca Santuari, Carl Shneider, Wigard Kloosterman, Jeroen de Ridder

Proceedings of the 14th IEEE International Conference on e-Science, 2018

2017

3D-e-Chem-VM: Structural Cheminformatics Research Infrastructure in a Freely Available Virtual Machine.

Ross McGuire, Stefan Verhoeven, Márton Vass, Gerrit Vriend, Iwan J. P. de Esch, Scott J. Lusher, Rob Leurs, Lars Ridder, Albert J. Kooistra, Tina Ritschel, Chris de Graaf

J. Chem. Inf. Model., 2017

2016

Using modular 3D digital earth applications based on point clouds for the study of complex sites.

Oscar Martinez-Rubi, Maurice de Kleijn, Stefan Verhoeven, Niels Drost, Jisk Attema, Maarten A. J. van Meersbergen, Rob van Nieuwpoort, Rens de Hond, Eduardo Dias, Pjotr Svetachov

Int. J. Digit. Earth, 2016

2013

Identification of new biomarker candidates for glucocorticoid induced insulin resistance using literature mining.

Wilco W. M. Fleuren, Erik J. M. Toonen, Stefan Verhoeven, Raoul Frijters, Tim Hulsen, Ton Rullmann, René C. van Schaik, Jacob de Vlieg, Wynand Alkema

BioData Min., 2013

2011

GPCRDB: information system for G protein-coupled receptors.

Bas Vroling, Marijn P. A. Sanders, Coos Baakman, Annika Borrmann, Stefan Verhoeven, Jan P. G. Klomp, Laerte Oliveira, Jacob de Vlieg, Gert Vriend

Nucleic Acids Res., 2011

CoPub update: CoPub 5.0 a text mining system to answer biological questions.

Wilco W. M. Fleuren, Stefan Verhoeven, Raoul Frijters, Bart Heupers, Jan Polman, René C. van Schaik, Jacob de Vlieg, Wynand Alkema

Nucleic Acids Res., 2011

Snooker: A Structure-Based Pharmacophore Generation Tool Applied to Class A GPCRs.

Marijn P. A. Sanders, Stefan Verhoeven, Chris de Graaf, Luc Roumen, Bas Vroling, Sander B. Nabuurs, Jacob de Vlieg, Jan P. G. Klomp

J. Chem. Inf. Model., 2011

ss-TEA: Entropy based identification of receptor specific ligand binding residues from a multiple sequence alignment of class A GPCRs.

Marijn P. A. Sanders, Wilco W. M. Fleuren, Stefan Verhoeven, Sven van den Beld, Wynand Alkema, Jacob de Vlieg, Jan P. G. Klomp

BMC Bioinform., 2011

2005

CoPub Mapper: mining MEDLINE based on search term co-publication.

Blaise T. F. Alako, Antoine Veldhoven, Sjozef van Baal, Rob Jelier, Stefan Verhoeven, Ton Rullmann, Jan Polman, Guido Jenster

BMC Bioinform., 2005