Thierry Mora

According to our database, Thierry Mora authored at least 34 papers between 2005 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Bayesian estimation of the Kullback-Leibler divergence for categorical sytems using mixtures of Dirichlet priors.

Francesco Camaglia, Ilya Nemenman, Thierry Mora, Aleksandra M. Walczak

CoRR, 2023

2022

Learning the statistics and landscape of somatic mutation-induced insertions and deletions in antibodies.

Cosimo Lupo, Natanael Spisak, Aleksandra M. Walczak, Thierry Mora

PLoS Comput. Biol., 2022

Disorder and the Neural Representation of Complex Odors.

Kamesh Krishnamurthy, Ann M. Hermundstad, Thierry Mora, Aleksandra M. Walczak, Vijay Balasubramanian

Frontiers Comput. Neurosci., 2022

Learning low-dimensional generalizable natural features from retina using a U-net.

Siwei Wang, Benjamin Hoshal, Elizabeth de Laittre, Thierry Mora, Michael Berry, Stephanie E. Palmer

Proceedings of the Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, 2022

2021

Optimal prediction with resource constraints using the information bottleneck.

Vedant Sachdeva, Thierry Mora, Aleksandra M. Walczak, Stephanie E. Palmer

PLoS Comput. Biol., 2021

Probing T-cell response by sequence-based probabilistic modeling.

Barbara Bravi, Vinod P. Balachandran, Benjamin D. Greenbaum, Aleksandra M. Walczak, Thierry Mora, Rémi Monasson, Simona Cocco

PLoS Comput. Biol., 2021

MINIMALIST: Mutual INformatIon Maximization for Amortized Likelihood Inference from Sampled Trajectories.

Giulio Isacchini, Natanael Spisak, Armita Nourmohammad, Thierry Mora, Aleksandra M. Walczak

CoRR, 2021

The Connection between Discrete- and Continuous-Time Descriptions of Gaussian Continuous Processes.

Federica Ferretti, Victor Chardès, Thierry Mora, Aleksandra M. Walczak, Irene Giardina

CoRR, 2021

2020

Inferring the immune response from repertoire sequencing.

Maximilian Puelma Touzel, Aleksandra M. Walczak, Thierry Mora

PLoS Comput. Biol., 2020

Population variability in the generation and selection of T-cell repertoires.

Zachary Sethna, Giulio Isacchini, Thomas Dupic, Thierry Mora, Aleksandra M. Walczak, Yuval Elhanati

PLoS Comput. Biol., 2020

SOS: online probability estimation and generation of T-and B-cell receptors.

Giulio Isacchini, Carlos Olivares, Armita Nourmohammad, Aleksandra M. Walczak, Thierry Mora

Bioinform., 2020

A new inference approach for training shallow and deep generalized linear models of noisy interacting neurons.

Gabriel Mahuas, Giulio Isacchini, Olivier Marre, Ulisse Ferrari, Thierry Mora

Proceedings of the Advances in Neural Information Processing Systems 33: Annual Conference on Neural Information Processing Systems 2020, 2020

2019

Size and structure of the sequence space of repeat proteins.

Jacopo Marchi, Ezequiel A. Galpern, Rocío Espada, Diego U. Ferreiro, Aleksandra M. Walczak, Thierry Mora

PLoS Comput. Biol., 2019

Genesis of the αβ T-cell receptor.

Thomas Dupic, Quentin Marcou, Aleksandra M. Walczak, Thierry Mora

PLoS Comput. Biol., 2019

Modeling the Correlated Activity of Neural Populations: A Review.

Christophe Gardella, Olivier Marre, Thierry Mora

Neural Comput., 2019

OLGA: fast computation of generation probabilities of B- and T-cell receptor amino acid sequences and motifs.

Zachary Sethna, Yuval Elhanati, Jr Curtis G. Callan, Aleksandra M. Walczak, Thierry Mora

Bioinform., 2019

2018

Active degradation of MarA controls coordination of its downstream targets.

Nicholas A. Rossi, Thierry Mora, Aleksandra M. Walczak, Mary J. Dunlop

PLoS Comput. Biol., 2018

A Simple Model for Low Variability in Neural Spike Trains.

Ulisse Ferrari, Stéphane Deny, Olivier Marre, Thierry Mora

Neural Comput., 2018

2017

Persisting fetal clonotypes influence the structure and overlap of adult human T cell receptor repertoires.

Mikhail V. Pogorelyy, Yuval Elhanati, Quentin Marcou, Anastasiia L. Sycheva, Ekaterina Komech, Vadim I. Nazarov, Olga V. Britanova, Dmitry M. Chudakov, Ilgar Z. Mamedov, Yuri B. Lebedev, Thierry Mora, Aleksandra M. Walczak

PLoS Comput. Biol., 2017

Variable habitat conditions drive species covariation in the human microbiota.

Charles K. Fisher, Thierry Mora, Aleksandra M. Walczak

PLoS Comput. Biol., 2017

Inferring repeat-protein energetics from evolutionary information.

Rocío Espada, R. Gonzalo Parra, Thierry Mora, Aleksandra M. Walczak, Diego U. Ferreiro

PLoS Comput. Biol., 2017

Restricted Boltzmann Machines provide an accurate metric for retinal responses to visual stimuli.

Christophe Gardella, Olivier Marre, Thierry Mora

Proceedings of the 5th International Conference on Learning Representations, 2017

2016

repgenHMM: a dynamic programming tool to infer the rules of immune receptor generation from sequence data.

Yuval Elhanati, Quentin Marcou, Thierry Mora, Aleksandra M. Walczak

Bioinform., 2016

2015

High Accuracy Decoding of Dynamical Motion from a Large Retinal Population.

Olivier Marre, Vicente Botella-Soler, Kristina D. Simmons, Thierry Mora, Gasper Tkacik, Michael J. Berry II

PLoS Comput. Biol., 2015

Capturing coevolutionary signals inrepeat proteins.

Rocío Espada, R. Gonzalo Parra, Thierry Mora, Aleksandra M. Walczak, Diego U. Ferreiro

BMC Bioinform., 2015

2014

Flocking and turning: a new model for self-organized collective motion.

Andrea Cavagna, Lorenzo Del Castello, Irene Giardina, Tomas Grigera, Asja Jelic, Stefania Melillo, Thierry Mora, Leonardo Parisi, Edmondo Silvestri, Massimiliano Viale, Aleksandra M. Walczak

CoRR, 2014

2009

Steps in the Bacterial Flagellar Motor.

Thierry Mora, Howard Yu, Yoshiyuki Sowa, Ned S. Wingreen

PLoS Comput. Biol., 2009

2008

Pairs of SAT-assignments in random Boolean formulæ.

Hervé Daudé, Marc Mézard, Thierry Mora, Riccardo Zecchina

Theor. Comput. Sci., 2008

2007

Random subcubes as a toy model for constraint satisfaction problems

Thierry Mora, Lenka Zdeborová

CoRR, 2007

2006

Error Exponents of Low-Density Parity-Check Codes on the Binary Erasure Channel

Thierry Mora, Olivier Rivoire

CoRR, 2006

Geometrical organization of solutions to random linear Boolean equations

Thierry Mora, Marc Mézard

CoRR, 2006

Statistical mechanics of error exponents for error-correcting codes

Thierry Mora, Olivier Rivoire

CoRR, 2006

2005

Pairs of SAT Assignment in Random Boolean Formulae

Hervé Daudé, Marc Mézard, Thierry Mora, Riccardo Zecchina

CoRR, 2005

Clustering of solutions in the random satisfiability problem

Marc Mézard, Thierry Mora, Riccardo Zecchina

CoRR, 2005