Aleksandra M. Walczak

Orcid: 0000-0002-2686-5702

Affiliations:
  • École Normale Supérieure, Paris, France


According to our database1, Aleksandra M. Walczak authored at least 25 papers between 2008 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2023
Bayesian estimation of the Kullback-Leibler divergence for categorical sytems using mixtures of Dirichlet priors.
CoRR, 2023

2022
Learning the statistics and landscape of somatic mutation-induced insertions and deletions in antibodies.
PLoS Comput. Biol., 2022

Disorder and the Neural Representation of Complex Odors.
Frontiers Comput. Neurosci., 2022

2021
Optimal prediction with resource constraints using the information bottleneck.
PLoS Comput. Biol., 2021

Probing T-cell response by sequence-based probabilistic modeling.
PLoS Comput. Biol., 2021

MINIMALIST: Mutual INformatIon Maximization for Amortized Likelihood Inference from Sampled Trajectories.
CoRR, 2021

The Connection between Discrete- and Continuous-Time Descriptions of Gaussian Continuous Processes.
CoRR, 2021

2020
Inferring the immune response from repertoire sequencing.
PLoS Comput. Biol., 2020

Population variability in the generation and selection of T-cell repertoires.
PLoS Comput. Biol., 2020

SOS: online probability estimation and generation of T-and B-cell receptors.
Bioinform., 2020

2019
Size and structure of the sequence space of repeat proteins.
PLoS Comput. Biol., 2019

Genesis of the αβ T-cell receptor.
PLoS Comput. Biol., 2019

Dissipation in Non-Steady State Regulatory Circuits.
Entropy, 2019

OLGA: fast computation of generation probabilities of B- and T-cell receptor amino acid sequences and motifs.
Bioinform., 2019

2018
Precision in a rush: Trade-offs between reproducibility and steepness of the hunchback expression pattern.
PLoS Comput. Biol., 2018

Active degradation of MarA controls coordination of its downstream targets.
PLoS Comput. Biol., 2018

2017
Persisting fetal clonotypes influence the structure and overlap of adult human T cell receptor repertoires.
PLoS Comput. Biol., 2017

Variable habitat conditions drive species covariation in the human microbiota.
PLoS Comput. Biol., 2017

Inferring repeat-protein energetics from evolutionary information.
PLoS Comput. Biol., 2017

2016
Noise Expands the Response Range of the <i>Bacillus subtilis</i> Competence Circuit.
PLoS Comput. Biol., 2016

Precision of Readout at the hunchback Gene: Analyzing Short Transcription Time Traces in Living Fly Embryos.
PLoS Comput. Biol., 2016

repgenHMM: a dynamic programming tool to infer the rules of immune receptor generation from sequence data.
Bioinform., 2016

2015
Capturing coevolutionary signals inrepeat proteins.
BMC Bioinform., 2015

2014
Flocking and turning: a new model for self-organized collective motion.
CoRR, 2014

2008
The Energy Landscapes of Repeat-Containing Proteins: Topology, Cooperativity, and the Folding Funnels of One-Dimensional Architectures.
PLoS Comput. Biol., 2008


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