Thomas Boudier

According to our database, Thomas Boudier authored at least 14 papers between 1997 and 2021.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2021

EM-stellar: benchmarking deep learning for electron microscopy image segmentation.

Afshin Khadangi, Thomas Boudier, Vijay Rajagopal

Bioinform., 2021

2020

EM-net: Deep learning for electron microscopy image segmentation.

Afshin Khadangi, Thomas Boudier, Vijay Rajagopal

Proceedings of the 25th International Conference on Pattern Recognition, 2020

2018

Persistent homology for object segmentation in multidimensional grayscale images.

Rabih Assaf, Alban Goupil, Valeriu Vrabie, Thomas Boudier, Mohammad Kacim

Pattern Recognit. Lett., 2018

2017

NucleiNet: A convolutional encoder-decoder network for bio-image denoising.

Zichuan Liu, Yifei Hu, Hang Xu, Lamees Nasser, Philippe Coquet, Thomas Boudier, Hao Yu

Proceedings of the 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2017

2016

OpenSegSPIM: a user-friendly segmentation tool for SPIM data.

Laurent Gole, Kok Haur Ong, Thomas Boudier, Weimiao Yu, Sohail Ahmed

Bioinform., 2016

2015

Detection of high-grade atypia nuclei in breast cancer imaging.

Henri Noël, Ludovic Roux, Shijian Lu, Thomas Boudier

Proceedings of the Medical Imaging 2015: Digital Pathology, 2015

2014

A generic classification-based method for segmentation of nuclei in 3D images of early embryos.

Jaza Gul-Mohammed, Ignacio Arganda-Carreras, Philippe Andrey, Vincent Galy, Thomas Boudier

BMC Bioinform., 2014

Classified region growing for 3D segmentation of packed nuclei.

Jaza Gul-Mohammed, Thomas Boudier

Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

2013

TANGO: a generic tool for high-throughput 3D image analysis for studying nuclear organization.

Jean Ollion, Julien Cochennec, François Loll, Christophe Escudé, Thomas Boudier

Bioinform., 2013

2010

NEMO: a tool for analyzing gene and chromosome territory distributions from 3D-FISH experiments.

E. Iannuccelli, F. Mompart, Joël Gellin, Yvette Lahbib-Mansais, Martine Yerle, Thomas Boudier

Bioinform., 2010

2007

TomoJ: tomography software for three-dimensional reconstruction in transmission electron microscopy.

Cédric Messaoudi, Thomas Boudier, Carlos Oscar Sánchez Sorzano, Sergio Marco

BMC Bioinform., 2007

2000

VIDOS, a system for video editing and format conversion over the Internet.

Thomas Boudier, David M. Shotton

Comput. Networks, 2000

1999

Organising multi-dimensional biological image information: the BioImage Database.

José María Carazo, Ernst H. K. Stelzer, A. Engel, I. Fita, C. Henn, J. Machtynger, P. McNeil, David M. Shotton, Monica Chagoyen, Pedro A. de Alarcón, R. Fritsch, J. B. Heymann, Susana G. Kalko, J. J. Pittet, Patricia Rodriguez-Tomé, Thomas Boudier

Nucleic Acids Res., 1999

1997

Computational Study of the Chitin Secreting Gland of Riftia pachyptila.

Thomas Boudier, Francoise Gaill, Anne Strauss

Proceedings of the Biocomputing and emergent computation: Proceedings of BCEC97, 1997