Tim Scherr

According to our database, Tim Scherr authored at least 11 papers between 2019 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

CoNIC Challenge: Pushing the frontiers of nuclear detection, segmentation, classification and counting.

Simon Graham, Quoc Dang Vu, Mostafa Jahanifar, Martin Weigert, Uwe Schmidt, Wenhua Zhang, Jun Zhang, Sen Yang, Jinxi Xiang, Xiyue Wang, Josef Lorenz Rumberger, Elias Baumann, Peter Hirsch, Lihao Liu, Chenyang Hong, Angelica I. Avilés-Rivero, Ayushi Jain, Heeyoung Ahn, Yiyu Hong, Hussam Azzuni, Min Xu, Mohammad Yaqub, Marie-Claire Blache, Benoît Piégu, Bertrand Vernay, Tim Scherr, Moritz Böhland, Katharina Löffler, Jiachen Li, Weiqin Ying, Chixin Wang, David R. J. Snead, Shan-E-Ahmed Raza, Fayyaz Minhas, Nasir M. Rajpoot

Medical Image Anal., February, 2024

ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud.

Johannes Seiffarth, Tim Scherr, Bastian Wollenhaupt, Oliver Neumann, Hanno Scharr, Dietrich Kohlheyer, Ralf Mikut, Katharina Nöh

SoftwareX, 2024

2023

Deep Learning-Based Particle Detection and Instance Segmentation for Microscopy Images.

Tim Scherr

PhD thesis, 2023

CoNIC Challenge: Pushing the Frontiers of Nuclear Detection, Segmentation, Classification and Counting.

Simon Graham, Quoc Dang Vu, Mostafa Jahanifar, Martin Weigert, Uwe Schmidt, Wenhua Zhang, Jun Zhang, Sen Yang, Jinxi Xiang, Xiyue Wang, Josef Lorenz Rumberger, Elias Baumann, Peter Hirsch, Lihao Liu, Chenyang Hong, Angelica I. Avilés-Rivero, Ayushi Jain, Heeyoung Ahn, Yiyu Hong, Hussam Azzuni, Min Xu, Mohammad Yaqub, Marie-Claire Blache, Benoît Piégu, Bertrand Vernay, Tim Scherr, Moritz Böhland, Katharina Löffler, Jiachen Li, Weiqin Ying, Chixin Wang, Dagmar Kainmueller, Carola-Bibiane Schönlieb, Shuolin Liu, Dhairya Talsania, Yughender Meda, Prakash Mishra, Muhammad Ridzuan, Oliver Neumann, Marcel P. Schilling, Markus Reischl, Ralf Mikut, Banban Huang, Hsiang-Chin Chien, Ching-Ping Wang, Chia-Yen Lee, Hong-Kun Lin, Zaiyi Liu, Xipeng Pan, Chu Han, Jijun Cheng, Muhammad Dawood, Srijay Deshpande, Raja Muhammad Saad Bashir, Adam Shephard, Pedro Costa, João D. Nunes, Aurélio Campilho, Jaime S. Cardoso, Hrishikesh P. S, Densen Puthussery, Devika R. G, Jiji C V, Ye Zhang, Zijie Fang, Zhifan Lin, Yongbing Zhang, Chunhui Lin, Liukun Zhang, Lijian Mao, Min Wu, Thi Tuong Vi Vo, Soo-Hyung Kim, Taebum Lee, Satoshi Kondo, Satoshi Kasai, Pranay Dumbhare, Vedant Phuse, Yash Dubey, Ankush Jamthikar, Trinh Thi Le Vuong, Jin Tae Kwak, Dorsa Ziaei, Hyun Jung, Tianyi Miao, David R. J. Snead, Shan-E-Ahmed Raza, Fayyaz Minhas, Nasir M. Rajpoot

CoRR, 2023

2022

Data for - Tracking one-in-a-million: Large-scale benchmark for microbial single-cell tracking with experiment-aware robustness metrics.

Johannes Seiffarth, Luisa Blöbaum, Katharina Löffler, Tim Scherr, Alexander Grünberger, Hanno Scharr, Ralf Mikut, Katharina Nöh

Dataset, October, 2022

microbeSEG dataset.

Tim Scherr, Johannes Seiffarth, Bastian Wollenhaupt, Oliver Neumann, Marcel P. Schilling, Dietrich Kohlheyer, Hanno Scharr, Katharina Nöh, Ralf Mikut

Dataset, April, 2022

ciscNet - A Single-Branch Cell Instance Segmentation and Classification Network.

Moritz Böhland, Oliver Neumann, Marcel P. Schilling, Markus Reischl, Ralf Mikut, Katharina Löffler, Tim Scherr

CoRR, 2022

Automated Annotator Variability Inspection for Biomedical Image Segmentation.

Marcel P. Schilling, Tim Scherr, Friedrich R. Münke, Oliver Neumann, Mark Schutera, Ralf Mikut, Markus Reischl

IEEE Access, 2022

2020

Cell Segmentation and Tracking using Distance Transform Predictions and Movement Estimation with Graph-Based Matching.

Tim Scherr, Katharina Löffler, Moritz Böhland, Ralf Mikut

CoRR, 2020

BeadNet: deep learning-based bead detection and counting in low-resolution microscopy images.

Tim Scherr, Karolin Streule, Andreas Bartschat, Moritz Böhland, Johannes Stegmaier, Markus Reischl, Véronique Orian-Rousseau, Ralf Mikut

Bioinform., 2020

2019

Fuzzy tissue detection for real-time focal control in corneal confocal microscopy.

Andreas Bartschat, Stephan Allgeier, Tim Scherr, Johannes Stegmaier, Sebastian Bohn, Klaus-Martin Reichert, Arjan Kuijper, Markus Reischl, Oliver Stachs, Bernd Köhler, Ralf Mikut

Autom., 2019