Mohammad Yaqub

Orcid: 0000-0001-6896-1105

According to our database1, Mohammad Yaqub authored at least 82 papers between 2011 and 2024.

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Bibliography

2024
CoNIC Challenge: Pushing the frontiers of nuclear detection, segmentation, classification and counting.
Medical Image Anal., February, 2024

Envisioning MedCLIP: A Deep Dive into Explainability for Medical Vision-Language Models.
CoRR, 2024

EDUE: Expert Disagreement-Guided One-Pass Uncertainty Estimation for Medical Image Segmentation.
CoRR, 2024

MedPromptX: Grounded Multimodal Prompting for Chest X-ray Diagnosis.
CoRR, 2024

TiBiX: Leveraging Temporal Information for Bidirectional X-ray and Report Generation.
CoRR, 2024

FissionFusion: Fast Geometric Generation and Hierarchical Souping for Medical Image Analysis.
CoRR, 2024

HuLP: Human-in-the-Loop for Prognosis.
CoRR, 2024

MedMerge: Merging Models for Effective Transfer Learning to Medical Imaging Tasks.
CoRR, 2024

SurvRNC: Learning Ordered Representations for Survival Prediction using Rank-N-Contrast.
CoRR, 2024

CoReEcho: Continuous Representation Learning for 2D+time Echocardiography Analysis.
CoRR, 2024

ConDiSR: Contrastive Disentanglement and Style Regularization for Single Domain Generalization.
CoRR, 2024

Advanced Tumor Segmentation in Medical Imaging: An Ensemble Approach for BraTS 2023 Adult Glioma and Pediatric Tumor Tasks.
CoRR, 2024

XReal: Realistic Anatomy and Pathology-Aware X-ray Generation via Controllable Diffusion Model.
CoRR, 2024

Fine-Tuned Large Language Models for Symptom Recognition from Spanish Clinical Text.
CoRR, 2024

RespiroDynamics: A Multifaceted Dataset for Enhanced Lung Health Assessment Using Deep Learning.
IEEE Access, 2024

2023
MGMT promoter methylation status prediction using MRI scans? An extensive experimental evaluation of deep learning models.
Medical Image Anal., December, 2023

Machine learning for accurate estimation of fetal gestational age based on ultrasound images.
npj Digit. Medicine, 2023

Multi-Task Learning Approach for Unified Biometric Estimation from Fetal Ultrasound Anomaly Scans.
CoRR, 2023

FUSC: Fetal Ultrasound Semantic Clustering of Second Trimester Scans Using Deep Self-supervised Learning.
CoRR, 2023

UniLVSeg: Unified Left Ventricular Segmentation with Sparsely Annotated Echocardiogram Videos through Self-Supervised Temporal Masking and Weakly Supervised Training.
CoRR, 2023

LegoNet: Alternating Model Blocks for Medical Image Segmentation.
CoRR, 2023

Prompt-based Tuning of Transformer Models for Multi-Center Medical Image Segmentation.
CoRR, 2023

Surgical tool classification and localization: results and methods from the MICCAI 2022 SurgToolLoc challenge.
CoRR, 2023

Improving Performance of Private Federated Models in Medical Image Analysis.
CoRR, 2023

CoNIC Challenge: Pushing the Frontiers of Nuclear Detection, Segmentation, Classification and Counting.
CoRR, 2023

In Quest of Ground Truth: Learning Confident Models and Estimating Uncertainty in the Presence of Annotator Noise.
CoRR, 2023

PECon: Contrastive Pretraining to Enhance Feature Alignment Between CT and EHR Data for Improved Pulmonary Embolism Diagnosis.
Proceedings of the Machine Learning in Medical Imaging - 14th International Workshop, 2023

Super Images - A New 2D Perspective on 3D Medical Imaging Analysis.
Proceedings of the Medical Image Understanding and Analysis - 27th Annual Conference, 2023

FUSQA: Fetal Ultrasound Segmentation Quality Assessment.
Proceedings of the Medical Imaging with Deep Learning, 2023

DGM-DR: Domain Generalization with Mutual Information Regularized Diabetic Retinopathy Classification.
Proceedings of the Domain Adaptation and Representation Transfer - 5th MICCAI Workshop, 2023

SEDA: Self-ensembling ViT with Defensive Distillation and Adversarial Training for Robust Chest X-Rays Classification.
Proceedings of the Domain Adaptation and Representation Transfer - 5th MICCAI Workshop, 2023

Breaking down the Hierarchy: A New Approach to Leukemia Classification.
Proceedings of the Applications of Medical Artificial Intelligence, 2023

Leveraging Self-supervised Learning for Fetal Cardiac Planes Classification Using Ultrasound Scan Videos.
Proceedings of the Simplifying Medical Ultrasound - 4th International Workshop, 2023

Lifelong Learning of Task-Parameter Relationships for Knowledge Transfer.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2023

2022
A Radiogenomics Pipeline for Lung Nodules Segmentation and Prediction of EGFR Mutation Status from CT Scans.
CoRR, 2022

Self-omics: A Self-supervised Learning Framework for Multi-omics Cancer Data.
CoRR, 2022

Segmentation with Super Images: A New 2D Perspective on 3D Medical Image Analysis.
CoRR, 2022

Color Space-based HoVer-Net for Nuclei Instance Segmentation and Classification.
CoRR, 2022

SubOmiEmbed: Self-supervised Representation Learning of Multi-omics Data for Cancer Type Classification.
CoRR, 2022

Hyperparameter Optimization for COVID-19 Chest X-Ray Classification.
CoRR, 2022

Is Contrastive Learning Suitable for Left Ventricular Segmentation in Echocardiographic Images?
CoRR, 2022

Deep Learning-based Quality Assessment of Clinical Protocol Adherence in Fetal Ultrasound Dating Scans.
CoRR, 2022

Challenges in COVID-19 Chest X-Ray Classification: Problematic Data or Ineffective Approaches?
CoRR, 2022

Deep Learning Techniques for Diabetic Retinopathy Classification: A Survey.
IEEE Access, 2022

Contrastive Pretraining for Echocardiography Segmentation with Limited Data.
Proceedings of the Medical Image Understanding and Analysis - 26th Annual Conference, 2022

Self-supervision and Multi-task Learning: Challenges in Fine-Grained COVID-19 Multi-class Classification from Chest X-rays.
Proceedings of the Medical Image Understanding and Analysis - 26th Annual Conference, 2022

Automatic Segmentation of Head and Neck Tumor: How Powerful Transformers Are?
Proceedings of the International Conference on Medical Imaging with Deep Learning, 2022

Is it Possible to Predict MGMT Promoter Methylation from Brain Tumor MRI Scans using Deep Learning Models?
Proceedings of the International Conference on Medical Imaging with Deep Learning, 2022

End-to-End Myocardial Infarction Classification from Echocardiographic Scans.
Proceedings of the Simplifying Medical Ultrasound - Third International Workshop, 2022

TMSS: An End-to-End Transformer-Based Multimodal Network for Segmentation and Survival Prediction.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

EchoCoTr: Estimation of the Left Ventricular Ejection Fraction from Spatiotemporal Echocardiography.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

GARDNet: Robust Multi-view Network for Glaucoma Classification in Color Fundus Images.
Proceedings of the Ophthalmic Medical Image Analysis - 9th International Workshop, 2022

Automatic Quality Assessment of First Trimester Crown-Rump-Length Ultrasound Images.
Proceedings of the Simplifying Medical Ultrasound - Third International Workshop, 2022

DRGen: Domain Generalization in Diabetic Retinopathy Classification.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Self-Ensembling Vision Transformer (SEViT) for Robust Medical Image Classification.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Weakly Unsupervised Domain Adaptation for Vestibular Schwannoma Segmentation.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2022

TransResNet: Integrating the Strengths of ViTs and CNNs for High Resolution Medical Image Segmentation via Feature Grafting.
Proceedings of the 33rd British Machine Vision Conference 2022, 2022

On the Importance of Image Encoding in Automated Chest X-Ray Report Generation.
Proceedings of the 33rd British Machine Vision Conference 2022, 2022

How to Train Vision Transformer on Small-scale Datasets?
Proceedings of the 33rd British Machine Vision Conference 2022, 2022

2021
Continual Domain Incremental Learning for Chest X-Ray Classification in Low-Resource Clinical Settings.
Proceedings of the Domain Adaptation and Representation Transfer, and Affordable Healthcare and AI for Resource Diverse Global Health, 2021

An Ensemble Approach for Patient Prognosis of Head and Neck Tumor Using Multimodal Data.
Proceedings of the Head and Neck Tumor Segmentation and Outcome Prediction, 2021

Automatic Fetal Gestational Age Estimation from First Trimester Scans.
Proceedings of the Simplifying Medical Ultrasound - Second International Workshop, 2021

2020
A High-Resolution Global Map of Giant Kelp (Macrocystis pyrifera) Forests and Intertidal Green Algae (Ulvophyceae) with Sentinel-2 Imagery.
Remote. Sens., 2020

Automatic C-Plane Detection in Pelvic Floor Transperineal Volumetric Ultrasound.
Proceedings of the Medical Ultrasound, and Preterm, Perinatal and Paediatric Image Analysis, 2020

2018
Fully-automated alignment of 3D fetal brain ultrasound to a canonical reference space using multi-task learning.
Medical Image Anal., 2018

Flower classification using deep convolutional neural networks.
IET Comput. Vis., 2018

2016
Plane Localization in 3-D Fetal Neurosonography for Longitudinal Analysis of the Developing Brain.
IEEE J. Biomed. Health Informatics, 2016

Automated 3D Ultrasound Biometry Planes Extraction for First Trimester Fetal Assessment.
Proceedings of the Machine Learning in Medical Imaging - 7th International Workshop, 2016

2015
Learning-based prediction of gestational age from ultrasound images of the fetal brain.
Medical Image Anal., 2015

Automated Mid-sagittal Plane Selection for Corpus Callosum Visualization in 3D Ultrasound Images.
Proceedings of the Medical Image Understanding and Analysis, 2015

Guided Random Forests for Identification of Key Fetal Anatomy and Image Categorization in Ultrasound Scans.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference Munich, Germany, October 5, 2015

2014
Investigation of the Role of Feature Selection and Weighted Voting in Random Forests for 3-D Volumetric Segmentation.
IEEE Trans. Medical Imaging, 2014

Evaluation and Comparison of Current Fetal Ultrasound Image Segmentation Methods for Biometric Measurements: A Grand Challenge.
IEEE Trans. Medical Imaging, 2014

A Constrained Regression Forests Solution to 3D Fetal Ultrasound Plane Localization for Longitudinal Analysis of Brain Growth and Maturation.
Proceedings of the Machine Learning in Medical Imaging - 5th International Workshop, 2014

Predicting Fetal Neurodevelopmental Age from Ultrasound Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

2013
Volumetric Segmentation of Key Fetal Brain Structures in 3D Ultrasound.
Proceedings of the Machine Learning in Medical Imaging - 4th International Workshop, 2013

Class-Specific Regression Random Forest for Accurate Extraction of Standard Planes from 3D Echocardiography.
Proceedings of the Medical Computer Vision. Large Data in Medical Imaging, 2013

Where is my baby? A fast fetal head auto-alignment in 3D-ultrasound.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

2012
Novel Context Rich LoCo and GloCo Features with Local and Global Shape Constraints for Segmentation of 3D Echocardiograms with Random Forests.
Proceedings of the Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging, 2012

Automatic detection of local fetal brain structures in ultrasound images.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

2011
Improving the Classification Accuracy of the Classic RF Method by Intelligent Feature Selection and Weighted Voting of Trees with Application to Medical Image Segmentation.
Proceedings of the Machine Learning in Medical Imaging - Second International Workshop, 2011

Learning Optical Flow Propagation Strategies Using Random Forests for Fast Segmentation in Dynamic 2D & 3D Echocardiography.
Proceedings of the Machine Learning in Medical Imaging - Second International Workshop, 2011


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