Tuyen Do

According to our database, Tuyen Do authored at least 15 papers between 2022 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Toward Autonomous Biofilm Engineering: A Vision for a Digital Twin-Based Lab Automation.

Bichar Dip Shrestha Gurung, Timothy W. Hartman, Tuyen Do, Venkataramana Gadhamshetty, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2025

Digital Twin Forecasting of Quorum-Sensing Associated Biofilm Microorganisms in Urban Wastewater Over a 30-Week Interval.

Bichar Dip Shrestha Gurung, Tuyen Do, Shiva Aryal, Naina Maharjan, Dikshya Bhandari, Bipul Bhattarai, Venkataramana Gadhamshetty, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2025

Functional Biofilm-Associated Microbial Markers in a Colorectal Cancer Cohort: Evidence for Quorum Sensing, Exopolysaccharide Production, and Biofilm-Driven Pathogenesis.

Grace Goeden, Tuyen Do, Bichar Dip Shrestha Gurung, Venkataramana Gadhamshetty, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2025

Metagenomic Functional Signatures for Real-Time Predictive Monitoring of Cyanobacterial Bloom Assessment and Biofilm Marker Discovery in Managed Freshwater Systems.

Tuyen Do, Naina Maharjan, Connor Johansen-Sallee, Bichar Dip Shrestha Gurung, Paula Mazzer, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2025

2024

Biofilm marker discovery with cloud-based dockerized metagenomics analysis of microbial communities.

Etienne Z. Gnimpieba, Timothy W. Hartman, Tuyen Do, Jessica Zylla, Shiva Aryal, Samuel J. Haas, Diing D. M. Agany, Bichar Dip Shrestha Gurung, Valena Doe, Zelaikha B. Yosufzai, Daniel Pan, Ross Campbell, Victor C. Huber, Rajesh Kumar Sani, Venkataramana Gadhamshetty, Carol Lushbough

Briefings Bioinform., July, 2024

Leveraging Multi-AI Agents for Cross-Domain Knowledge Discovery.

Shiva Aryal, Tuyen Do, Bisesh Heyojoo, Sandeep Chataut, Bichar Dip Shrestha Gurung, Venkataramana Gadhamshetty, Etienne Z. Gnimpieba

CoRR, 2024

Comparative Study of Domain Driven Terms Extraction Using Large Language Models.

Sandeep Chataut, Tuyen Do, Bichar Dip Shrestha Gurung, Shiva Aryal, Anup Khanal, Carol Lushbough, Etienne Z. Gnimpieba

CoRR, 2024

Applying the DeepSeqDock Harmonization Framework on Pseudomonas Aeruginosa Bacterial Biofilm Data.

Corey Zhao, Bichar Dip Shrestha Gurung, Timothy W. Hartman, Tuyen Do, Mariah M. Hoffman, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

NFB-Checker: An AI/ML-Powered Microorganism Nitrogen Fixation Susceptibility Prediction from Gene Collection.

Tuyen Do, Shiva Aryal, Bichar Dip Shrestha Gurung, Diing D. M. Agany, Nick Klein, Ruanbao Zhou, Rajesh Kumar Sani, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

Toward Fine-Tuning Large Language Models in Ontology of Microbial Phenotypes Construction.

Anushuya Baidya, Tuyen Do, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

2023

SIMPL - An Application for Cell and Microbe Tracking Using Machine Learning.

Sam Haas, Bichar Dip Shrestha Gurung, Timothy W. Hartman, Tuyen Do, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

Transformer in Microbial Image Analysis: A Comparative Exploration of TransUNet, UNet, and DoubleUNet for SEM Image Segmentation.

Bichar Dip Shrestha Gurung, Anup Khanal, Timothy W. Hartman, Tuyen Do, Sandeep Chataut, Carol Lushbough, Venkataramana Gadhamshetty, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

Utilizing XGBoost for the Prediction of Material Corrosion Rates from Embedded Tabular Data using Large Language Model.

Tuyen Do, Bichar Dip Shrestha Gurung, Shiva Aryal, Anup Khanal, Sandeep Chataut, Venkataramana Gadhamshetty, Carol Lushbough, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022

Using BASIN-ML for Machine Learning-Based Statistical Analysis and Reporting for Biofilm Datasets.

Sam Haas, Timothy W. Hartman, Bichar Dip Shrestha Gurung, Tuyen Do, Rajesh Kumar Sani, Venkataramana Gadhamshetty, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

U-Net Based Image Segmentation Techniques for Development of Non-Biocidal Fouling-Resistant Ultra-Thin Two-dimensional (2D) Coatings.

Bichar Dip Shrestha Gurung, Ramesh Devadig, Tuyen Do, Venkataramana Gadhamshetty, Etienne Z. Gnimpieba

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022