Waldeyr M. C. Silva

According to our database, Waldeyr M. C. Silva authored at least 23 papers between 2016 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

transcAnalysis: A Snakemake Pipeline for Differential Expression and Post-transcriptional Modification Analysis.

Pedro H. A. Barros, Waldeyr M. C. Silva, Marcelo M. Brigido

Proceedings of the Advances in Bioinformatics and Computational Biology, 2023

2022

In Silico Analysis of the Genomic Potential for the Production of Specialized Metabolites of Ten Strains of the Bacillales Order Isolated from the Soil of the Federal District, Brazil.

Felipe de Araújo Mesquita, Waldeyr Mendes Cordeiro da Silva, Marlene Teixeira De-Souza

Proceedings of the Advances in Bioinformatics and Computational Biology, 2022

2021

Machine Learning Studies of Non-coding RNAs based on Artificially Constructed Training Data.

Mirele C. S. F. Costa, João Victor de Araújo Oliveira, Waldeyr M. C. Silva, Rituparno Sen, Jörg Fallmann, Peter F. Stadler, Maria Emília M. T. Walter

Proceedings of the 14th International Joint Conference on Biomedical Engineering Systems and Technologies, 2021

Resource Prediction Service for Efficient Execution of Bioinformatics Workflows in Federated Cloud with Machine Learning.

Matheus Sobrinho, Michel J. F. Rosa, Waldeyr M. C. Silva, Aletéia Patrícia Favacho de Araújo

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2020

Computational Simulations for Cyclizations Catalyzed by Plant Monoterpene Synthases.

Waldeyr Mendes Cordeiro da Silva, Daniela P. de Andrade, Jakob L. Andersen, Maria Emília Telles Walter, Marcelo M. Brigido, Peter F. Stadler, Christoph Flamm

Proceedings of the Advances in Bioinformatics and Computational Biology, 2020

Anti-CD3 Stimulated T Cell Transcriptome Reveals Novel ncRNAs and Correlates with a Suppressive Profile.

Manuela M. do Almo, Isabel G. Sousa, Waldeyr Mendes Cordeiro da Silva, Thomas Gatter, Peter F. Stadler, Steve Hoffmann, Andrea Queiroz Maranhão, Marcelo M. Brigido

Proceedings of the Advances in Bioinformatics and Computational Biology, 2020

2019

Designing Graph Databases With GRAPHED.

Gustavo Cordeiro Galvão Van Erven, Rommel Novaes Carvalho, Waldeyr Mendes Cordeiro da Silva, Sérgio Lifschitz, Harley Vera Olivera, Maristela Holanda

J. Database Manag., 2019

Managing data provenance for bioinformatics workflows using AProvBio.

Rodrigo F. Almeida, Waldeyr Mendes Cordeiro da Silva, Klayton Castro, Aletéia Patrícia Favacho de Araújo, Maria Emília Telles Walter, Sérgio Lifschitz, Maristela Holanda

Int. J. Comput. Biol. Drug Des., 2019

A NoSQL Solution for Bioinformatics Data Provenance Storage.

Ingrid Santana, Waldeyr Mendes Cordeiro da Silva, Maristela Holanda

Proceedings of the New Knowledge in Information Systems and Technologies, 2019

Venom Gland Peptides of Arthropods from the Brazilian Cerrado Biome Unveiled by Transcriptome Analysis.

Giovanni M. Guidini, Waldeyr M. C. Silva, Thalita S. Camargos, Caroline F. B. Mourão, Priscilla Galante, Tainá Raiol, Marcelo de Macedo Brígido, Maria Emília M. T. Walter, Elisabeth N. F. Schwartz

Proceedings of the Advances in Bioinformatics and Computational Biology, 2019

Enhancing Open Government Data With Data Provenance.

Cleyton P. dos Reis, Waldeyr M. C. Silva, Luiz C. B. Martins, Rodrigo Pinheiro, Márcio Victorino, Maristela Holanda

Proceedings of the 11th International Conference on Management of Digital EcoSystems, 2019

Data Provenance Management of Bioinformatics Workflows in Federated Clouds.

Polyane Wercelens, Waldeyr Mendes Cordeiro da Silva, Klayton Castro, Aletéia P. F. Araújo, Sérgio Lifschitz, Maristela Holanda

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

Big Data Trends in Bioinformatics.

Dennis Sávio M. da Silva, Waldeyr M. C. Silva, Guo RuiZhe, Ana Paula Bernardi, Ari Melo Mariano, Maristela Holanda

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2018

Human-Computer Interaction Communicability Evaluation Method Applied to Bioinformatics.

Gabriella Esteves, Waldeyr Mendes Cordeiro da Silva, Maria Emília Telles Walter, Marcelo M. Brigido, Fernanda Lima

Proceedings of the Trends and Advances in Information Systems and Technologies, 2018

GRAPHED: A Graph Description Diagram for Graph Databases.

Gustavo Cordeiro Galvão Van Erven, Waldeyr Mendes Cordeiro da Silva, Rommel N. Carvalho, Maristela Holanda

Proceedings of the Trends and Advances in Information Systems and Technologies, 2018

An Argumentation Theory-Based Multiagent Model to Annotate Proteins.

Daniel S. Souza, Waldeyr Mendes Cordeiro da Silva, Célia Ghedini Ralha, Maria Emília M. T. Walter

Proceedings of the Advances in Bioinformatics and Computational Biology, 2018

Graph Databases in Molecular Biology.

Waldeyr Mendes Cordeiro da Silva, Polyane Wercelens, Maria Emília M. T. Walter, Maristela Holanda, Marcelo M. Brigido

Proceedings of the Advances in Bioinformatics and Computational Biology, 2018

2017

A terpenoid metabolic network modelled as graph database.

Waldeyr Mendes Cordeiro da Silva, Danilo Vilar, Daniel S. Souza, Maria Emília Telles Walter, Maristela Terto de Holanda, Marcelo de Macedo Brígido

Int. J. Data Min. Bioinform., 2017

Data provenance management for bioinformatics workflows using NoSQL database systems in a cloud computing environment.

Fernanda Hondo, Polyane Wercelens, Waldeyr Mendes Cordeiro da Silva, Klayton Castro, Ingrid Santana, Maria Emília Telles Walter, Aletéia Patrícia Favacho de Araújo, Maristela Holanda, Sérgio Lifschitz

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

AProvBio: An architecture for data provenance in bioinformatics workflows using graph database.

Rodrigo F. Almeida, Waldeyr Mendes Cordeiro da Silva, Klayton Castro, Maria Emília Telles Walter, Aletéia Patrícia Favacho de Araújo, Maristela Holanda, Sérgio Lifschitz

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2016

2Path: A terpenoid metabolic network modeled as graph database.

Waldeyr Mendes Cordeiro da Silva, Danilo Vilar, Daniel S. Souza, Maria Emília Telles Walter, Marcelo M. Brigido, Maristela Holanda

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

An evaluation of data replication for bioinformatics workflows on NoSQL systems.

Iasmini Lima, Matheus Oliveira, Diego Kieckbusch, Maristela Holanda, Maria Emília M. T. Walter, Aletéia Patrícia Favacho de Araújo, Márcio Victorino, Waldeyr Mendes Cordeiro da Silva, Sérgio Lifschitz

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

K-mer Mapping and de Bruijn graphs: The case for velvet fragment assembly.

Elvismary Molina de Armas, Edward Hermann Haeusler, Sérgio Lifschitz, Maristela Terto de Holanda, Waldeyr Mendes Cordeiro da Silva, Paulo Cavalcanti Gomes Ferreira

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016