Wayne B. Hayes

Affiliations:
  • University of California, Irvine, Department of Computer Science, CA, USA
  • University of Toronto, Department of Computer Science, ON, Canada


According to our database1, Wayne B. Hayes authored at least 20 papers between 2003 and 2021.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

Online presence:

On csauthors.net:

Bibliography

2021
Common Neighbors Extension of the Sticky Model for PPI Networks Evaluated by Global and Local Graphlet Similarity.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021

2020
An Introductory Guide to Aligning Networks Using SANA, the Simulated Annealing Network Aligner.
Proceedings of the Protein-Protein Interaction Networks, Methods and Protocols., 2020

SL-GLAlign: improving local alignment of biological networks through simulated annealing.
Netw. Model. Anal. Health Informatics Bioinform., 2020

Exact p-values for global network alignments via combinatorial analysis of shared GO terms.
CoRR, 2020

2019
BLANT - fast graphlet sampling tool.
Bioinform., 2019

Comparing Different Graphlet Measures for Evaluating Network Model Fits to BioGRID PPI Networks.
Proceedings of the Algorithms for Computational Biology - 6th International Conference, 2019

2018
SANA NetGO: a combinatorial approach to using Gene Ontology (GO) terms to score network alignments.
Bioinform., 2018

2017
Graphettes: Constant-time determination of graphlet and orbit identity including (possibly disconnected) graphlets up to size 8.
CoRR, 2017

SANA: simulated annealing far outperforms many other search algorithms for biological network alignment.
Bioinform., 2017

2014
A BMP-FGF Morphogen Toggle Switch Drives the Ultrasensitive Expression of Multiple Genes in the Developing Forebrain.
PLoS Comput. Biol., 2014

2013
Graphlet-based measures are suitable for biological network comparison.
Bioinform., 2013

2012
Automated quantitative description of spiral galaxy arm-segment structure.
Proceedings of the 2012 IEEE Conference on Computer Vision and Pattern Recognition, 2012

2011
Tinkerbell Is Chaotic.
SIAM J. Appl. Dyn. Syst., 2011

GraphCruch 2: Software tool for network modeling, alignment and clustering.
BMC Bioinform., 2011

2010
Algorithm 908: Online Exact Summation of Floating-Point Streams.
ACM Trans. Math. Softw., 2010

Geometric Evolutionary Dynamics of Protein Interaction Networks.
Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010

2009
Correct Rounding and a Hybrid Approach to Exact Floating-Point Summation.
SIAM J. Sci. Comput., 2009

2007
Robust and reliable defect control for Runge-Kutta methods.
ACM Trans. Math. Softw., 2007

A Fast Shadowing Algorithm for High-Dimensional ODE Systems.
SIAM J. Sci. Comput., 2007

2003
Rigorous Shadowing of Numerical Solutions of Ordinary Differential Equations by Containment.
SIAM J. Numer. Anal., 2003


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